RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 PATE4P0C8F1 98 aa13.06□□□□□ -0.32
RUNX3-201ENST00000308873 CCNOP22674 350 aa13.06□□□□□ -0.32
RUNX3-201ENST00000308873 IGFBP4P22692 258 aa13.06□□□□□ -0.32
RUNX3-201ENST00000308873 TAS2R46P59540 309 aa13.06□□□□□ -0.32
RUNX3-201ENST00000308873 GUK1Q16774 197 aa13.06□□□□□ -0.32
RUNX3-201ENST00000308873 Q7L0L9 218 aa13.06□□□□□ -0.32
RUNX3-201ENST00000308873 ADAMTS17Q8TE56 1095 aa13.06□□□□□ -0.32
RUNX3-201ENST00000308873 ZNF285Q96NJ3 590 aa13.06□□□□□ -0.32
RUNX3-201ENST00000308873 CNTNAP3Q9BZ76 1288 aa13.06□□□□□ -0.32
RUNX3-201ENST00000308873 COA4Q9NYJ1 87 aa13.06□□□□□ -0.32
RUNX3-201ENST00000308873 RFNGQ9Y644 331 aa13.06□□□□□ -0.32
RUNX3-201ENST00000308873 C2orf16Q68DN1 1984 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 DHRS7CA6NNS2 312 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 OR5H8P0DN80 308 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 HKR1P10072 659 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 RAET1LQ5VY80 246 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 FBXW12Q6X9E4 464 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 OR5AS1Q8N127 324 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 AKR7LQ8NHP1 331 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 SH3BGRL3Q9H299 93 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 FAM212BQ9NTI7 297 aaPredicted RBP13.05□□□□□ -0.32
RUNX3-201ENST00000308873 ZNF581Q9P0T4 197 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 MIOXQ9UGB7 285 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 CA14Q9ULX7 337 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 BORCS7-ASMTA0A0B4J1R7 106 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 ZNF814B7Z6K7 855 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 TLX3O43711 291 aaPredicted RBP13.05□□□□□ -0.32
RUNX3-201ENST00000308873 HAGHQ16775 308 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 FAM209BQ5JX69 171 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 LYZL2Q7Z4W2 148 aa13.05□□□□□ -0.32
RUNX3-201ENST00000308873 CARHSP1Q9Y2V2 147 aaKnown RBP13.05□□□□□ -0.32
RUNX3-201ENST00000308873 A0A1B0GX78 115 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 FTCDNL1E5RQL4 147 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 F8VVB4 439 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 F8VWA3 439 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 PHF1O43189 567 aaPredicted RBP13.04□□□□□ -0.32
RUNX3-201ENST00000308873 OR5AC1P0C628 307 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 ZNF708P17019 499 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 TBPP20226 339 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 NHLH2Q02577 135 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 HABP2Q14520 560 aaPredicted RBP13.04□□□□□ -0.32
RUNX3-201ENST00000308873 LIPT2A6NK58 231 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 CDRT15L2A8MXV6 281 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 CST4P01036 141 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 APOBEC1P41238 236 aaKnown RBP13.04□□□□□ -0.32
RUNX3-201ENST00000308873 DVL1P1P54792 670 aaPredicted RBP13.04□□□□□ -0.32
RUNX3-201ENST00000308873 ACTBL2Q562R1 376 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 DEGS2Q6QHC5 323 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 ZFP62Q8NB50 900 aaPredicted RBP13.04□□□□□ -0.32
RUNX3-201ENST00000308873 EMG1Q92979 244 aaKnown RBP13.04□□□□□ -0.32
RUNX3-201ENST00000308873 PTX4Q96A99 478 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 DENND4AQ7Z401 1863 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 DUX1O43812 170 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 JTBO76095 146 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 TLE1Q04724 770 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 PLXDC1Q8IUK5 500 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 PECRQ9BY49 303 aa13.04□□□□□ -0.32
RUNX3-201ENST00000308873 ZNF107Q9UII5 783 aaPredicted RBP13.04□□□□□ -0.32
RUNX3-201ENST00000308873 IGKV1-9A0A0C4DH69 117 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 LOC390937A0A1W2PQ73 354 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 SRSF10O75494 262 aaKnown RBP13.03□□□□□ -0.32
RUNX3-201ENST00000308873 LCATP04180 440 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 CD37P11049 281 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 HLA-GP17693 338 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 NAAAQ02083 359 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 THEM4Q5T1C6 240 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 AADACL3Q5VUY0 350 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 RPUSD3Q6P087 351 aaKnown RBP13.03□□□□□ -0.32
RUNX3-201ENST00000308873 FBXO46Q6PJ61 603 aaPredicted RBP13.03□□□□□ -0.32
RUNX3-201ENST00000308873 RTN4IP1Q8WWV3 396 aaPredicted RBP13.03□□□□□ -0.32
RUNX3-201ENST00000308873 HIST1H2BAQ96A08 127 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 ZNF442Q9H7R0 627 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 KNTC1P50748 2209 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 WDFY3Q8IZQ1 3526 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 E9PLN8 166 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 ONECUT2O95948 504 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 POU2F2P09086 479 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 FASLGP48023 281 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 HNRNPKP61978 463 aaKnown RBP eCLIP13.03□□□□□ -0.32
RUNX3-201ENST00000308873 OR11L1Q8NGX0 322 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 LUZP4Q9P127 313 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 MCTS1Q9ULC4 181 aaKnown RBP13.03□□□□□ -0.32
RUNX3-201ENST00000308873 SRPK3Q9UPE1 567 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 COLCA2A8K830 154 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 IFI6P09912 130 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 ZNF728P0DKX0 622 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 CSNK1A1P48729 337 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 NDUFA6P56556 154 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 C9orf152Q5JTZ5 239 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 DOK3Q7L591 496 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 POC1AQ8NBT0 407 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 NOXO1Q8NFA2 376 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 DEFB126Q9BYW3 111 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 ALKBH4Q9NXW9 302 aa13.03□□□□□ -0.32
RUNX3-201ENST00000308873 ATXN7O15265 892 aaPredicted RBP13.02□□□□□ -0.32
RUNX3-201ENST00000308873 QRFPP83859 136 aa13.02□□□□□ -0.32
RUNX3-201ENST00000308873 ZNF674Q2M3X9 581 aa13.02□□□□□ -0.32
RUNX3-201ENST00000308873 MISPQ8IVT2 679 aa13.02□□□□□ -0.32
RUNX3-201ENST00000308873 RNASE11Q8TAA1 199 aaKnown RBP13.02□□□□□ -0.32
RUNX3-201ENST00000308873 AQP10Q96PS8 301 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms