RNA–Protein interactions for RNA: ENST00000299138.11

VPS35-201, Transcript of VPS35, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS35, Length 6,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-201ENST00000299138 OR7C1O76099 320 aaPredicted RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 CHRNA7P36544 502 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 FAM3AP98173 230 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 C1orf100Q5SVJ3 147 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 PRSS54Q6PEW0 395 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 GLCCI1Q86VQ1 547 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 LINC00052Q96N35 136 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 PTDSS2Q9BVG9 487 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 CLDND1Q9NY35 253 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 ZFC3H1O60293 1989 aaKnown RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 NDUFS6O75380 124 aaKnown RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 ZNF324O75467 553 aaPredicted RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 PAX5Q02548 391 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 PIP5KL1Q5T9C9 394 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 OR8A1Q8NGG7 326 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 OR51S1Q8NGJ8 323 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 SNX22Q96L94 193 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 RNF2Q99496 336 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 REG4Q9BYZ8 158 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 TMEM191AQ9H0A3 160 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 RNF122Q9H9V4 155 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 CLEC5AQ9NY25 188 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 PIPOXQ9P0Z9 390 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 SRPK3Q9UPE1 567 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 TCRBV21S2A2A0A5A6 115 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 APODP05090 189 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 IAPPP10997 89 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 FCGR2AP12318 317 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 NOVA1P51513 510 aaKnown RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 ZNF658BQ4V348 819 aaPredicted RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 ZNF776Q68DI1 518 aaPredicted RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 VHLLQ6RSH7 139 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 OR5D18Q8NGL1 313 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 OR13C8Q8NGS7 320 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 FAM210BQ96KR6 192 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 MMACHCQ9Y4U1 282 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 LDLRAD4O15165 306 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 ACTR1BP42025 376 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 RIPPLY3P57055 190 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 KHDC1LQ5JSQ8 128 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 LYPD8Q6UX82 237 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 SYT9Q86SS6 491 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 SLC22A24Q8N4F4 322 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 CNRIP1Q96F85 164 aaPredicted RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 GMPPAQ96IJ6 420 aaPredicted RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 SLC46A2Q9BY10 475 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 SELENOIQ9C0D9 397 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 CHST6Q9GZX3 395 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 OR10A2Q9H208 303 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 KIR2DS5A0A0G2JLQ3 304 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 A0A0G2JNG1 304 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 KIR2DS3K7RE56 304 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 CCL16O15467 120 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 GNG7O60262 68 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 NKX2-1P43699 371 aaPredicted RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 CAMPP49913 170 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 SUMO3P55854 103 aaPredicted RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 CKS1BP61024 79 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 RPS21P63220 83 aaKnown RBP5.76□□□□□ -1.49
VPS35-201ENST00000299138 KIR2DS5Q14953 304 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 TMEM128Q5BJH2 165 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 SLC25A42Q86VD7 318 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 NKAIN4Q8IVV8 208 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 OR5D13Q8NGL4 314 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 OR1N2Q8NGR9 330 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 ANAPC13Q9BS18 74 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 NKX2-4Q9H2Z4 354 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 OR51M1Q9H341 326 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 DAPP1Q9UN19 280 aa5.76□□□□□ -1.49
VPS35-201ENST00000299138 VSTM2BA6NLU5 285 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 EFSO43281 561 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 CXCL14O95715 111 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 BLVRBP30043 206 aaPredicted RBP5.75□□□□□ -1.49
VPS35-201ENST00000299138 PPIAP62937 165 aaKnown RBP5.75□□□□□ -1.49
VPS35-201ENST00000299138 MRPL2Q5T653 305 aaKnown RBP5.75□□□□□ -1.49
VPS35-201ENST00000299138 FAM69BQ5VUD6 431 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 TGIF2LYQ8IUE0 185 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 MKXQ8IYA7 352 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 PRSS35Q8N3Z0 413 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 TTC9BQ8N6N2 239 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 OR4C16Q8NGL9 310 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 FGF14Q92915 247 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 C4orf45Q96LM5 186 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 TBX15Q96SF7 602 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 LRIT1Q9P2V4 623 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 TMED3Q9Y3Q3 217 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 LNP1A1A4G5 178 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 NGFRP08138 427 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 HIST1H1CP16403 213 aaKnown RBP5.75□□□□□ -1.49
VPS35-201ENST00000299138 DUSP1P28562 367 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 SPCS3P61009 180 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 ROM1Q03395 351 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 MGAT2Q10469 447 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 MELKQ14680 651 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 Q56UQ5 140 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 CSNK1A1LQ8N752 337 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 OR11H4Q8NGC9 324 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 ADAMTS17Q8TE56 1095 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 TMEM106AQ96A25 262 aa5.75□□□□□ -1.49
VPS35-201ENST00000299138 GNG12Q9UBI6 72 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms