RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 A0A0B4J203 849 aa15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 NCBP2LA6PVI3 153 aaKnown RBP15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 GPR37O15354 613 aa15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 SCAF4O95104 1147 aaKnown RBP15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 CSF2RBP32927 897 aa15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 IL34Q6ZMJ4 242 aa15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 TGIF2Q9GZN2 237 aa15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 H3BMH7 237 aa15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 NGFRP08138 427 aa15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 PTGFRP43088 359 aa15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 HYAL3O43820 417 aaPredicted RBP15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 ZFPL1O95159 310 aa15.71■□□□□ 0.11
CDC42EP3-201ENST00000295324 GVINP1Q7Z2Y8 2422 aa15.71■□□□□ 0.1
CDC42EP3-201ENST00000295324 UBE2KP61086 200 aa15.71■□□□□ 0.1
CDC42EP3-201ENST00000295324 FAM27D1Q5T7N8 215 aa15.71■□□□□ 0.1
CDC42EP3-201ENST00000295324 RTN4IP1Q8WWV3 396 aaPredicted RBP15.71■□□□□ 0.1
CDC42EP3-201ENST00000295324 FYTTD1Q96QD9 318 aaKnown RBP15.71■□□□□ 0.1
CDC42EP3-201ENST00000295324 GPR35Q9HC97 309 aa15.71■□□□□ 0.1
CDC42EP3-201ENST00000295324 EXOGQ9Y2C4 368 aaKnown RBP15.71■□□□□ 0.1
CDC42EP3-201ENST00000295324 ADAM20O43506 726 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 ZIC2O95409 532 aaPredicted RBP15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 CD3DP04234 171 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 MDH2P40926 338 aaKnown RBP15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 KCNJ3P48549 501 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 THNSL2Q86YJ6 484 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 MRPS18BQ9Y676 258 aaKnown RBP15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 IGKV1-8A0A0C4DH67 115 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 FABP7O15540 132 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 PLPP2O43688 288 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 IGHA2P01877 340 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 TMEM41BQ5BJD5 291 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 SCARF2Q96GP6 870 aaPredicted RBP15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 HPNP05981 417 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 TGIF1Q15583 401 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 ZNF528Q3MIS6 628 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 SPANXN5Q5MJ07 72 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR10P1Q8NGE3 313 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 TMEM171Q8WVE6 324 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 SLC17A5Q9NRA2 495 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 NUP214P35658 2090 aaPredicted RBP15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 WISP3O95389 354 aaPredicted RBP15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 ZBTB25P24278 435 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 ASAH1Q13510 395 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 PINX1Q96BK5 328 aaKnown RBP15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 YIPF6Q96EC8 236 aa15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 ZNF275Q9NSD4 429 aaPredicted RBP15.7■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR6S1Q8NH40 331 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 UCN2Q96RP3 112 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 RHNO1Q9BSD3 238 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 ATXN7O15265 892 aaPredicted RBP15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 GALP22466 123 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 CEACAM3P40198 252 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 CSN1S1P47710 185 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 GINS3Q9BRX5 216 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 SVILO95425 2214 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 FUCA1P04066 466 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 NUBP1P53384 320 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 NAA40Q86UY6 237 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 ARRDC1Q8N5I2 433 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 AHRRA9YTQ3 701 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 MPZL1O95297 269 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 PIGPP57054 158 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 SLC51BQ86UW2 128 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 TMEM251Q8N6I4 163 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 DYNC2LI1Q8TCX1 351 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 RNF141Q8WVD5 230 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 DTX4Q9Y2E6 619 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 HS3ST3B1Q9Y662 390 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 SAP30LQ9HAJ7 183 aa15.69■□□□□ 0.1
CDC42EP3-201ENST00000295324 M0R1X1 148 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 SIX6O95475 246 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 CEACAM1P13688 526 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 NME2P22392 152 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 PRRX1P54821 245 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 BSCL2Q96G97 398 aaPredicted RBP15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 CMTM3Q96MX0 182 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 C3orf80F5H4A9 247 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 GPR31O00270 319 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 CCSO14618 274 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 SLC25A35Q3KQZ1 300 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 ZNF439Q8NDP4 499 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR5H6Q8NGV6 325 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 MARCH1Q8TCQ1 289 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 SLC7A6Q92536 515 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 ANGPTL4Q9BY76 406 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 STRAPQ9Y3F4 350 aaKnown RBP15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 TRBV5-3A0A0A0MS03 114 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 MESTQ5EB52 335 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 TMEM230Q96A57 120 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 M6PRP20645 277 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 FGF9P31371 208 aaPredicted RBP15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 RAB7AP51149 207 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 ALKAL2Q6UX46 152 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 SLC38A6Q8IZM9 456 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR8U1Q8NH10 309 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR6C3Q9NZP0 311 aa15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 AMMECR1Q9Y4X0 333 aaPredicted RBP15.68■□□□□ 0.1
CDC42EP3-201ENST00000295324 FOXL2P58012 376 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 CDONQ4KMG0 1287 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 CELF2-AS1Q8N7Q2 184 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms