RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ZNF385CQ66K41 422 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-201ENST00000277198 PRSS54Q6PEW0 395 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 ZNF283Q8N7M2 679 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 CLRN3Q8NCR9 226 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 OR10G3Q8NGC4 313 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 DCUN1D4Q92564 292 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 DNAJB11Q9UBS4 358 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 HRH3Q9Y5N1 445 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 FLVCR1Q9Y5Y0 555 aa11.34□□□□□ -0.59
C9orf3-201ENST00000277198 BSNQ9UPA5 3926 aa11.33□□□□□ -0.59
C9orf3-201ENST00000277198 C13orf42A0A1B0GVH6 325 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 TMEM218A2RU14 115 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 FOXI3A8MTJ6 420 aaPredicted RBP11.33□□□□□ -0.6
C9orf3-201ENST00000277198 RER1O15258 196 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 OR2J2O76002 312 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 ATG12O94817 140 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 CD79AP11912 226 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 CD82P27701 267 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 SLC6A9P48067 706 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 EIF5AP63241 154 aaKnown RBP11.33□□□□□ -0.6
C9orf3-201ENST00000277198 BEX5Q5H9J7 111 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 CLEC18BQ6UXF7 455 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 SLC16A14Q7RTX9 510 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 SVBPQ8N300 66 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 PP6455Q8WZ26 134 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 TMEM230Q96A57 120 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 AQP10Q96PS8 301 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 GPER1Q99527 375 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 SPSB2Q99619 263 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 TM2D1Q9BX74 207 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 NKX6-2Q9C056 277 aaPredicted RBP11.33□□□□□ -0.6
C9orf3-201ENST00000277198 ZNF319Q9P2F9 582 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 IL17BQ9UHF5 180 aa11.33□□□□□ -0.6
C9orf3-201ENST00000277198 TP53I11O14683 189 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 SMAD9O15198 467 aaKnown RBP11.32□□□□□ -0.6
C9orf3-201ENST00000277198 CRTAPO75718 401 aaPredicted RBP11.32□□□□□ -0.6
C9orf3-201ENST00000277198 VAMP5O95183 116 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 AMY2BP19961 511 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 IL32P24001 234 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 CDAP32320 146 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 PTGFRP43088 359 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 OR3A2P47893 321 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 FOXL2P58012 376 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 DEFA5Q01523 94 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 AIMP2Q13155 320 aaKnown RBP11.32□□□□□ -0.6
C9orf3-201ENST00000277198 PABPC1L2AQ5JQF8 200 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 C10orf128Q5T292 105 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 PDSS1Q5T2R2 415 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 ATP1A1-AS1Q5TC04 95 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 TMPPEQ6ZT21 453 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 FOXL2NBQ6ZUU3 175 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 FAM57BQ71RH2 274 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 ARMC10Q8N2F6 343 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 IL22RA1Q8N6P7 574 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 GJC3Q8NFK1 279 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 EMG1Q92979 244 aaKnown RBP11.32□□□□□ -0.6
C9orf3-201ENST00000277198 ARHGAP5-AS1Q96IT6 56 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 FAM71F1Q96KD3 344 aaPredicted RBP11.32□□□□□ -0.6
C9orf3-201ENST00000277198 CRB3Q9BUF7 120 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 ZNF416Q9BWM5 594 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 PCDHB16Q9NRJ7 776 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 OSGIN2Q9Y236 505 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 IGKV1-9A0A0C4DH69 117 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 A0A1W2PNR3 127 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 ATP6V1G2-DDX39BF2Z307 99 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 TAAR5O14804 337 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 EIF1BO60739 113 aaKnown RBP11.32□□□□□ -0.6
C9orf3-201ENST00000277198 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 FGF5P12034 268 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 MSR1P21757 451 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 H3F3AP84243 136 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 ARFRP1Q13795 201 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 KISS1Q15726 138 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 C10orf91Q5T1B1 145 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 EIF5AL1Q6IS14 154 aaKnown RBP11.32□□□□□ -0.6
C9orf3-201ENST00000277198 ATRAIDQ6UW56 229 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 WDSUB1Q8N9V3 476 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 OR1S2Q8NGQ3 325 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 ARL11Q969Q4 196 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 C2orf50Q96LR7 162 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 RASL10BQ96S79 203 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 RTBDNQ9BSG5 229 aaPredicted RBP11.32□□□□□ -0.6
C9orf3-201ENST00000277198 DEFB126Q9BYW3 111 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 NELFAQ9H3P2 528 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 CYTL1Q9NRR1 136 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 PURGQ9UJV8 347 aaKnown RBP11.32□□□□□ -0.6
C9orf3-201ENST00000277198 MEMO1Q9Y316 297 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 V9GYS6 101 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 EXPH5Q8NEV8 1989 aa11.32□□□□□ -0.6
C9orf3-201ENST00000277198 RAD51DO75771 328 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 DHRS3O75911 302 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 NPY4RP50391 375 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 UCNP55089 124 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 SUPT4H1P63272 117 aaKnown RBP11.31□□□□□ -0.6
C9orf3-201ENST00000277198 GFOD2Q3B7J2 385 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 TMEM176BQ3YBM2 270 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-201ENST00000277198 AADACL3Q5VUY0 350 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 UNQ6126/PRO20091Q6UXV3 157 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 IL34Q6ZMJ4 242 aa11.31□□□□□ -0.6
C9orf3-201ENST00000277198 PPP1R3BQ86XI6 285 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms