RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MMP28Q9H239 520 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 IL36GQ9NZH8 169 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 ANKRD30BLA7E2S9 258 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 LILRA1O75019 489 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 LPLP06858 475 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 MGMTP16455 207 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 SNTB2Q13425 540 aaKnown RBP14.04□□□□□ -0.16
TPM1-201ENST00000267996 SPATA46Q5T0L3 261 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 OLFML2AQ68BL7 652 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 OR2T2Q6IF00 324 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 LIX1LQ8IVB5 337 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 OR56B1Q8NGI3 324 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 OR5A2Q8NGI9 324 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 SLC25A40Q8TBP6 338 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 MARS2Q96GW9 593 aaKnown RBP14.04□□□□□ -0.16
TPM1-201ENST00000267996 METTL9Q9H1A3 318 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 HRASLSQ9HDD0 168 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 ELOVL5Q9NYP7 299 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 TAS2R8Q9NYW2 309 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 NLKQ9UBE8 527 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 IGHV2OR16-5A0A0B4J2B6 119 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 IGKV1-12A0A0C4DH73 117 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 SOCS1O15524 211 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 IGKV1D-12P01611 117 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 TMEM50BP56557 158 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 CDNFQ49AH0 187 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 TMEM211Q6ICI0 200 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 PLET1Q6UQ28 207 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 UNQ6126/PRO20091Q6UXV3 157 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 Q6ZTK2 550 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 NCCRP1Q6ZVX7 275 aaPredicted RBP14.04□□□□□ -0.16
TPM1-201ENST00000267996 C1orf174Q8IYL3 243 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 RELL2Q8NC24 303 aaPredicted RBP14.04□□□□□ -0.16
TPM1-201ENST00000267996 ST6GALNAC3Q8NDV1 305 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 Q8NFD4 153 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 OR1J1Q8NGS3 322 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 OR10K1Q8NGX5 313 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 OR5P3Q8WZ94 311 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 USB1Q9BQ65 265 aaKnown RBP14.04□□□□□ -0.16
TPM1-201ENST00000267996 MARVELD1Q9BSK0 173 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 SELENOIQ9C0D9 397 aa14.04□□□□□ -0.16
TPM1-201ENST00000267996 MRPL15Q9P015 296 aaKnown RBP14.04□□□□□ -0.16
TPM1-201ENST00000267996 SHANK1Q9Y566 2161 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 TMEM235A6NFC5 223 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 NAP1L6A6NFF2 107 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 IQCF6A8MYZ5 107 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 EEF1E1-BLOC1S5C9J1V9 151 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 SPRY1O43609 319 aaPredicted RBP14.03□□□□□ -0.16
TPM1-201ENST00000267996 ANGPTL7O43827 346 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 PFDN1O60925 122 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 ZNF780AO75290 641 aaPredicted RBP14.03□□□□□ -0.16
TPM1-201ENST00000267996 GSTP1P09211 210 aaKnown RBP14.03□□□□□ -0.16
TPM1-201ENST00000267996 SERPINA2P20848 420 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 RAD52P43351 418 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 ERVS71-1P61550 626 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 FAM27E3Q08E93 113 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 PLAC9Q5JTB6 97 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 GLCCI1Q86VQ1 547 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 CALHM1Q8IU99 346 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 SAXO1Q8IYX7 474 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 CHST4Q8NCG5 386 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 CCDC120Q96HB5 630 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 RNF170Q96K19 258 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 Q96M66 194 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 ACTR6Q9GZN1 396 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 ZMAT3Q9HA38 289 aaKnown RBP14.03□□□□□ -0.16
TPM1-201ENST00000267996 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.03□□□□□ -0.16
TPM1-201ENST00000267996 ZNF107Q9UII5 783 aaPredicted RBP14.03□□□□□ -0.16
TPM1-201ENST00000267996 SH3BGRL2Q9UJC5 107 aa14.03□□□□□ -0.16
TPM1-201ENST00000267996 ELF5Q9UKW6 265 aaPredicted RBP14.03□□□□□ -0.16
TPM1-201ENST00000267996 ATRXP46100 2492 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 OR5B21A6NL26 309 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 HIST1H1DP16402 221 aaKnown RBP14.02□□□□□ -0.16
TPM1-201ENST00000267996 SELEP16581 610 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 CALCRP30988 508 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 CCKARP32238 428 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 NAAAQ02083 359 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 PSG7Q13046 419 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 RSU1Q15404 277 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 TMEM255AQ5JRV8 349 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 BHLHE23Q8NDY6 225 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 OR51T1Q8NGJ9 327 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 KLF14Q8TD94 323 aaPredicted RBP14.02□□□□□ -0.16
TPM1-201ENST00000267996 MUCL1Q96DR8 90 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 RAB3CQ96E17 227 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 MRPS24Q96EL2 167 aaKnown RBP14.02□□□□□ -0.16
TPM1-201ENST00000267996 HIST1H2AAQ96QV6 131 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 BCL2L14Q9BZR8 327 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 ELL3Q9HB65 397 aaPredicted RBP14.02□□□□□ -0.16
TPM1-201ENST00000267996 NPAP1Q9NZP6 1156 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 KCNK7Q9Y2U2 307 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 MEMO1Q9Y316 297 aa14.02□□□□□ -0.16
TPM1-201ENST00000267996 ZNF732B4DXR9 585 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 MFNGO00587 321 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 MT-ND4P03905 459 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 CSF1P09603 554 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 GTF2F2P13984 249 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 GNB3P16520 340 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 CPT2P23786 658 aa14.01□□□□□ -0.17
TPM1-201ENST00000267996 CA7P43166 264 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms