RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 B4GALNT1Q00973 533 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 TIAL1Q01085 375 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL5A3-201ENST00000264828 PPP1R1AQ13522 171 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 LHX8Q68G74 356 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 LTBP4Q8N2S1 1624 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 LRRC3CA6NJW4 275 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 FGF8P55075 233 aaPredicted RBP16.11■□□□□ 0.17
COL5A3-201ENST00000264828 Q56UQ5 140 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 MOB1BQ7L9L4 216 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 OR1F12Q8NHA8 337 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 BLNKQ8WV28 456 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 IFT22Q9H7X7 185 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 CDK5RAP2Q96SN8 1893 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 TRBV5-4A0A0C4DH59 114 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 MYBPHQ13203 477 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 GGNBP1Q5YKI7 109 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 Q6ZNB5 142 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 FAM24BQ8N5W8 94 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 RSRP1Q9BUV0 290 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 MSL2Q9HCI7 577 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 TRGV8A0A0C4DH27 118 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 TMEM30CPA0ZSE6 113 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 ABCD3P28288 659 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 RAE1P78406 368 aaKnown RBP16.11■□□□□ 0.17
COL5A3-201ENST00000264828 NT5CQ8TCD5 201 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 FOXB1Q99853 325 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 SIRT3Q9NTG7 399 aaPredicted RBP16.11■□□□□ 0.17
COL5A3-201ENST00000264828 ARID1BQ8NFD5 2236 aaPredicted RBP16.11■□□□□ 0.17
COL5A3-201ENST00000264828 CCR2P41597 374 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 CRYBB2P43320 205 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 VWA1Q6PCB0 445 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 TGIF2LXQ8IUE1 241 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 TBX21Q9UL17 535 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 ICAM5Q9UMF0 924 aa16.11■□□□□ 0.17
COL5A3-201ENST00000264828 SHISA7A6NL88 538 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 OPN1MWP04001 364 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 SLC25A5P05141 298 aaKnown RBP16.1■□□□□ 0.17
COL5A3-201ENST00000264828 OPN1MW2P0DN77 364 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 OPN1MW3P0DN78 364 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 CD96P40200 585 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 OR2A2Q6IF42 318 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 ABI3BPQ7Z7G0 1075 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 GPR137Q96N19 417 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 A0A1B0GTH9 108 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 OPRK1P41145 380 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 NHLH1Q02575 133 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 NHLH2Q02577 135 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 C9orf50Q5SZB4 431 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 XAF1Q6GPH4 301 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 FAAP24Q9BTP7 215 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 STRCP1A6NGW2 1772 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 PMS2P11Q13670 270 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 IQCJQ1A5X6 159 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 NEURL2Q9BR09 285 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 HDGFL3Q9Y3E1 203 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 TSPAN12O95859 305 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 CCL7P80098 99 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 CALHM3Q86XJ0 350 aa16.1■□□□□ 0.17
COL5A3-201ENST00000264828 BCL2L2Q92843 193 aaPredicted RBP16.1■□□□□ 0.17
COL5A3-201ENST00000264828 KISS1RQ969F8 398 aaPredicted RBP16.1■□□□□ 0.17
COL5A3-201ENST00000264828 FCGR3BO75015 233 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 CST4P01036 141 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 VN1R1Q9GZP7 353 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 FBP1P09467 338 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 OR3A4PP47883 348 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 RAB32Q13637 225 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 OR5C1Q8NGR4 320 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 UQCC1Q9NVA1 299 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 FUT3P21217 361 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 DSCR4P56555 118 aaPredicted RBP16.09■□□□□ 0.17
COL5A3-201ENST00000264828 SLC38A11Q08AI6 406 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 SNCGO76070 127 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 SRFP11831 508 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 CHRNA7P36544 502 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 C9orf170A2RU37 121 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 CBR3O75828 277 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 CD200P41217 278 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 WIPI1Q5MNZ9 446 aaPredicted RBP16.09■□□□□ 0.17
COL5A3-201ENST00000264828 KCNK15Q9H427 330 aa16.09■□□□□ 0.17
COL5A3-201ENST00000264828 FAM24AA6NFZ4 105 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 TOX3O15405 576 aaPredicted RBP16.08■□□□□ 0.17
COL5A3-201ENST00000264828 SFT2D2O95562 160 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 CCR5P51681 352 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 METAP1P53582 386 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 TMEM97Q5BJF2 176 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 C6orf201Q7Z4U5 140 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 OR1L4Q8NGR5 311 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 TEX50A0A1B0GTY4 177 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 APOBEC3DQ96AK3 386 aaPredicted RBP16.08■□□□□ 0.17
COL5A3-201ENST00000264828 FBXO17Q96EF6 278 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 AAMDCQ9H7C9 122 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 DOK5Q9P104 306 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 TRAPPC4Q9Y296 219 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 WSB1Q9Y6I7 421 aa16.08■□□□□ 0.17
COL5A3-201ENST00000264828 IGHV3-43A0A0B4J1X8 118 aa16.08■□□□□ 0.16
COL5A3-201ENST00000264828 IGHV3-43DP0DP04 118 aa16.08■□□□□ 0.16
COL5A3-201ENST00000264828 ZNF117Q03924 483 aa16.08■□□□□ 0.16
COL5A3-201ENST00000264828 ARRDC1Q8N5I2 433 aa16.08■□□□□ 0.16
COL5A3-201ENST00000264828 ZDHHC22Q8N966 263 aa16.08■□□□□ 0.16
COL5A3-201ENST00000264828 IL22RA2Q969J5 263 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms