RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 GNB3P16520 340 aa18.06■□□□□ 0.48
SNX3-201ENST00000230085 PTAFRP25105 342 aa18.06■□□□□ 0.48
SNX3-201ENST00000230085 ECI1P42126 302 aa18.06■□□□□ 0.48
SNX3-201ENST00000230085 PPP1R32Q7Z5V6 425 aa18.06■□□□□ 0.48
SNX3-201ENST00000230085 MARCH3Q86UD3 253 aa18.06■□□□□ 0.48
SNX3-201ENST00000230085 FAM89BQ8N5H3 189 aa18.06■□□□□ 0.48
SNX3-201ENST00000230085 ZNF321PQ8N8H1 164 aa18.06■□□□□ 0.48
SNX3-201ENST00000230085 SSC4DQ8WTU2 575 aa18.06■□□□□ 0.48
SNX3-201ENST00000230085 ADAT3Q96EY9 351 aaPredicted RBP18.06■□□□□ 0.48
SNX3-201ENST00000230085 GAL3ST1Q99999 423 aa18.06■□□□□ 0.48
SNX3-201ENST00000230085 CMSS1Q9BQ75 279 aaKnown RBP18.06■□□□□ 0.48
SNX3-201ENST00000230085 ZNF251Q9BRH9 671 aa18.06■□□□□ 0.48
SNX3-201ENST00000230085 RTBDNQ9BSG5 229 aaPredicted RBP18.06■□□□□ 0.48
SNX3-201ENST00000230085 SEBOXQ9HB31 216 aaPredicted RBP18.06■□□□□ 0.48
SNX3-201ENST00000230085 MAP1BP46821 2468 aaKnown RBP18.05■□□□□ 0.48
SNX3-201ENST00000230085 PCSK5Q92824 1860 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 IGHV3-20A0A0C4DH32 117 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 CDC14CA4D256 554 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 ZNF891A8MT65 544 aaPredicted RBP18.05■□□□□ 0.48
SNX3-201ENST00000230085 SMAD9O15198 467 aaKnown RBP18.05■□□□□ 0.48
SNX3-201ENST00000230085 ACAA1P09110 424 aaPredicted RBP18.05■□□□□ 0.48
SNX3-201ENST00000230085 SFTA3P0C7M3 94 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 CCL1P22362 96 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 ALDH3B1P43353 468 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 KCNJ3P48549 501 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 FOXK1P85037 733 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 SWI5Q1ZZU3 235 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 ANKRD37Q7Z713 158 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 ST8SIA1Q92185 356 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 TBL1XR1Q9BZK7 514 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 ARV1Q9H2C2 271 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 OR5AC2Q9NZP5 309 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 PTPRQQ9UMZ3 2332 aa18.05■□□□□ 0.48
SNX3-201ENST00000230085 MS4A18H0YCH9 400 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 SYT7O43581 403 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 EIF3GO75821 320 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNX3-201ENST00000230085 PMP2P02689 132 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 RCC1P18754 421 aaPredicted RBP18.04■□□□□ 0.48
SNX3-201ENST00000230085 AGAP20933 346 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 ADH6P28332 368 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 ZNF93P35789 620 aaPredicted RBP18.04■□□□□ 0.48
SNX3-201ENST00000230085 TAS2R46P59540 309 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 FAM3AP98173 230 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 PPA1Q15181 289 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 MS4A18Q3C1V0 323 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 ANGPTL5Q86XS5 388 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.04■□□□□ 0.48
SNX3-201ENST00000230085 TMEM234Q8WY98 164 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 EMG1Q92979 244 aaKnown RBP18.04■□□□□ 0.48
SNX3-201ENST00000230085 FOXN4Q96NZ1 517 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 PBOV1Q9GZY1 135 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 PPP4R1LQ9P1A2 415 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 METTL1Q9UBP6 276 aaKnown RBP18.04■□□□□ 0.48
SNX3-201ENST00000230085 GHRLQ9UBU3 117 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 A0A0A6YYD4 124 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 MASP2O00187 686 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 JTBO76095 146 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 MPZL1O95297 269 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 IGHEP01854 428 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 MT-ND4LP03901 98 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 CYC1P08574 325 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 PTGFRP43088 359 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 LPAR6P43657 344 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 SUMO3P55854 103 aaPredicted RBP18.04■□□□□ 0.48
SNX3-201ENST00000230085 ARL6IP1Q15041 203 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 TMPPEQ6ZT21 453 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 OR56B1Q8NGI3 324 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 RAB3CQ96E17 227 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 MALSU1Q96EH3 234 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 P4HTMQ9NXG6 502 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 CACFD1Q9UGQ2 172 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 STARD10Q9Y365 291 aa18.04■□□□□ 0.48
SNX3-201ENST00000230085 LOC102723996A0A087X1L8 192 aa18.03■□□□□ 0.48
SNX3-201ENST00000230085 FOXI3A8MTJ6 420 aaPredicted RBP18.03■□□□□ 0.48
SNX3-201ENST00000230085 K7ENP7 123 aa18.03■□□□□ 0.48
SNX3-201ENST00000230085 ETV2O00321 342 aaPredicted RBP18.03■□□□□ 0.48
SNX3-201ENST00000230085 HGFACQ04756 655 aa18.03■□□□□ 0.48
SNX3-201ENST00000230085 ANKRD55Q3KP44 614 aa18.03■□□□□ 0.48
SNX3-201ENST00000230085 PLAC9Q5JTB6 97 aa18.03■□□□□ 0.48
SNX3-201ENST00000230085 AADACL3Q5VUY0 350 aa18.03■□□□□ 0.48
SNX3-201ENST00000230085 INO80CQ6PI98 192 aaPredicted RBP18.03■□□□□ 0.48
SNX3-201ENST00000230085 KLHL24Q6TFL4 600 aa18.03■□□□□ 0.48
SNX3-201ENST00000230085 CPEB2Q7Z5Q1 589 aaKnown RBP18.03■□□□□ 0.48
SNX3-201ENST00000230085 OR5AS1Q8N127 324 aa18.03■□□□□ 0.48
SNX3-201ENST00000230085 ZNF561Q8N587 486 aa18.03■□□□□ 0.48
SNX3-201ENST00000230085 SLAMF6Q96DU3 332 aa18.03■□□□□ 0.48
SNX3-201ENST00000230085 TAF9BQ9HBM6 251 aa18.03■□□□□ 0.48
SNX3-201ENST00000230085 PNO1Q9NRX1 252 aaKnown RBP18.03■□□□□ 0.48
SNX3-201ENST00000230085 DSPP15924 2871 aaKnown RBP18.02■□□□□ 0.48
SNX3-201ENST00000230085 LOC100509620A0A075B734 347 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 A0A1W2PNV4 684 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 C1orf196B1AJZ1 125 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 HKR1P10072 659 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 TMPRSS3P57727 454 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 OTPQ5XKR4 325 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 RTL6Q6ICC9 239 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 OPN5Q6U736 354 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 H1FNTQ75WM6 255 aaPredicted RBP18.02■□□□□ 0.48
SNX3-201ENST00000230085 C9orf40Q8IXQ3 194 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 OR8D2Q9GZM6 311 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms