RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TCN2P20062 427 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 BTCP35070 178 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 ZXDAP98168 799 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 DPPA2Q7Z7J5 298 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 ZNF808Q8N4W9 903 aaPredicted RBP12.22□□□□□ -0.45
NFKB1-201ENST00000226574 DTWD2Q8NBA8 298 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 GPBAR1Q8TDU6 330 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 PTPMT1Q8WUK0 201 aaPredicted RBP12.22□□□□□ -0.45
NFKB1-201ENST00000226574 MALSU1Q96EH3 234 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 R4GN57 208 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 PKDREJQ9NTG1 2253 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 SCGB1D1O95968 90 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 LIMK1P53667 647 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 PMP22Q01453 160 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 TLE4Q04727 773 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 HYAL1Q12794 435 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 MRPL49Q13405 166 aaKnown RBP12.22□□□□□ -0.45
NFKB1-201ENST00000226574 SHBQ15464 509 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 GGNBP1Q5YKI7 109 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 RGS7BPQ6MZT1 257 aaPredicted RBP12.22□□□□□ -0.45
NFKB1-201ENST00000226574 Q7L0L9 218 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 INTS12Q96CB8 462 aaKnown RBP12.22□□□□□ -0.45
NFKB1-201ENST00000226574 TLNRD1Q9H1K6 362 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 PATZ1Q9HBE1 687 aaKnown RBP12.22□□□□□ -0.45
NFKB1-201ENST00000226574 LANCL2Q9NS86 450 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 SERTAD4Q9NUC0 356 aa12.22□□□□□ -0.45
NFKB1-201ENST00000226574 YBX2Q9Y2T7 364 aaKnown RBP12.22□□□□□ -0.45
NFKB1-201ENST00000226574 WNK3Q9BYP7 1800 aa12.21□□□□□ -0.45
NFKB1-201ENST00000226574 E5RGE8 158 aa12.21□□□□□ -0.45
NFKB1-201ENST00000226574 PHOX2AO14813 284 aa12.21□□□□□ -0.45
NFKB1-201ENST00000226574 MPPED2Q15777 294 aa12.21□□□□□ -0.45
NFKB1-201ENST00000226574 OR8B12Q8NGG6 310 aa12.21□□□□□ -0.45
NFKB1-201ENST00000226574 NSG2Q9Y328 171 aa12.21□□□□□ -0.45
NFKB1-201ENST00000226574 CASP8AP2Q9UKL3 1982 aa12.21□□□□□ -0.45
NFKB1-201ENST00000226574 A0A1W2PPH5 198 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 GPR137BO60478 399 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 OR5AC1P0C628 307 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 HAAOP46952 286 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 RTL6Q6ICC9 239 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 ZDHHC22Q8N966 263 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 AGBL5Q8NDL9 886 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 MCHR2Q969V1 340 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 ZNF576Q9H609 170 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 CRLF2Q9HC73 371 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 RASL12Q9NYN1 266 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 PHF3Q92576 2039 aaKnown RBP12.21□□□□□ -0.46
NFKB1-201ENST00000226574 SFT2D2O95562 160 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 HNF1AP20823 631 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 BMP5P22003 454 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 EIF1P41567 113 aaKnown RBP12.21□□□□□ -0.46
NFKB1-201ENST00000226574 ARG2P78540 354 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.21□□□□□ -0.46
NFKB1-201ENST00000226574 NHLRC3Q5JS37 347 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 OR2I1PQ8NGU4 316 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 IFT22Q9H7X7 185 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 UFSP2Q9NUQ7 469 aa12.21□□□□□ -0.46
NFKB1-201ENST00000226574 RCL1Q9Y2P8 373 aaKnown RBP12.21□□□□□ -0.46
NFKB1-201ENST00000226574 LMO7DNF2Z398 122 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 EIF1BO60739 113 aaKnown RBP12.2□□□□□ -0.46
NFKB1-201ENST00000226574 C9orf152Q5JTZ5 239 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 SPATA46Q5T0L3 261 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 VHLLQ6RSH7 139 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 ZNF561Q8N587 486 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 FSCN3Q9NQT6 498 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 ACACAQ13085 2346 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 NOTCH3Q9UM47 2321 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 TAAR5O14804 337 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 CDC14BO60729 498 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 PTAFRP25105 342 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 OR6S1Q8NH40 331 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 OXGR1Q96P68 337 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 GPHA2Q96T91 129 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 KIAA2026Q5HYC2 2103 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 C5orf49A4QMS7 147 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 NPBWR1P48145 328 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 ZNF133P52736 654 aaPredicted RBP12.2□□□□□ -0.46
NFKB1-201ENST00000226574 RPL19P84098 196 aaKnown RBP12.2□□□□□ -0.46
NFKB1-201ENST00000226574 BAXQ07812 192 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 EDDM3AQ14507 147 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 CEACAM16Q2WEN9 425 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 LINC01590Q5TEZ4 76 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 PRO1933Q9H354 126 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 OR5AC2Q9NZP5 309 aa12.2□□□□□ -0.46
NFKB1-201ENST00000226574 MCTS1Q9ULC4 181 aaKnown RBP12.2□□□□□ -0.46
NFKB1-201ENST00000226574 RGPD3A6NKT7 1758 aaPredicted RBP12.19□□□□□ -0.46
NFKB1-201ENST00000226574 RGPD4Q7Z3J3 1758 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 ZNF727A8MUV8 499 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 C2CD4DB7Z1M9 353 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 EIF3GO75821 320 aaKnown RBP eCLIP12.19□□□□□ -0.46
NFKB1-201ENST00000226574 POLR2GP62487 172 aaKnown RBP eCLIP12.19□□□□□ -0.46
NFKB1-201ENST00000226574 SSBP1Q04837 148 aaKnown RBP12.19□□□□□ -0.46
NFKB1-201ENST00000226574 MRGPREQ86SM8 312 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 OR10D4PQ8NGN7 298 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 OR1J1Q8NGS3 322 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 MRPL24Q96A35 216 aaKnown RBP12.19□□□□□ -0.46
NFKB1-201ENST00000226574 C12orf10Q9HB07 376 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 MMP26Q9NRE1 261 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 KLF4O43474 513 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 LAMTOR5O43504 91 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 LY86O95711 162 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms