RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 OR5B21A6NL26 309 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 PLPP3O14495 311 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 CCL2P13500 99 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 WDR38Q5JTN6 314 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 C20orf141Q9NUB4 165 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 V9GYS6 101 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 DBX1A6NMT0 343 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 PRR35P0CG20 571 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 SKP2Q13309 424 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 PDCD1Q15116 288 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 PXDC1Q5TGL8 231 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 STPG1Q5TH74 334 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 GPR32P1Q8NGA4 272 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 LILRB4Q8NHJ6 448 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 ZNRF4Q8WWF5 429 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 TSPAN32Q96QS1 320 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 UQCC2Q9BRT2 126 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 BRS3P32247 399 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 ZIC1Q15915 447 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 TMED6Q8WW62 240 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 LRFN3Q9BTN0 628 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 SLC31A2O15432 143 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 FCGR3BO75015 233 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 UBE2MP61081 183 aaKnown RBP16.88■□□□□ 0.29
SMPD3-201ENST00000219334 PMP22Q01453 160 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 ETFRF1Q6IPR1 90 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 CDH26Q8IXH8 852 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 OR8B3Q8NGG8 313 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 OR8B2Q96RD0 313 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 SF3B5Q9BWJ5 86 aaKnown RBP16.88■□□□□ 0.29
SMPD3-201ENST00000219334 ZNF416Q9BWM5 594 aa16.88■□□□□ 0.29
SMPD3-201ENST00000219334 CT62P0C5K7 136 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 SLC25A4P12235 298 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 DCTDP32321 178 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 C12orf73Q69YU5 71 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 TMEM229BQ8NBD8 167 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 FGF11Q92914 225 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 IL36GQ9NZH8 169 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 MBD1Q9UIS9 605 aaPredicted RBP16.87■□□□□ 0.29
SMPD3-201ENST00000219334 MPC1Q9Y5U8 109 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 OR4A8P0C604 315 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 CBLN3Q6UW01 205 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 OR6C3Q9NZP0 311 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 TRAPPC2P0DI81 140 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 TRAPPC2BP0DI82 140 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 PTGFRP43088 359 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 EXOSC2Q13868 293 aaKnown RBP16.87■□□□□ 0.29
SMPD3-201ENST00000219334 OR6X1Q8NH79 312 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 AQP8O94778 261 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 HNF1AP20823 631 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 CNN1P51911 297 aaKnown RBP16.87■□□□□ 0.29
SMPD3-201ENST00000219334 DCAF10Q5QP82 559 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 RPUSD4Q96CM3 377 aaKnown RBP16.87■□□□□ 0.29
SMPD3-201ENST00000219334 EID2BQ96D98 161 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 FAM122AQ96E09 287 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 MISP3Q96FF7 219 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 AUNIPQ9H7T9 357 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 UCK1Q9HA47 277 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 SLC35D1Q9NTN3 355 aa16.87■□□□□ 0.29
SMPD3-201ENST00000219334 TEX51A0A1B0GUA7 166 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 CCL21O00585 134 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 LIMS3P0CW19 117 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 LIMS4P0CW20 117 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 EPHA2P29317 976 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 RTP5Q14D33 572 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 ERRFI1Q9UJM3 462 aaPredicted RBP16.86■□□□□ 0.29
SMPD3-201ENST00000219334 SNRPGP15A8MWD9 76 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 PATE4P0C8F1 98 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 WNT3P56703 355 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 KIAA0040Q15053 153 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 GAB4Q2WGN9 574 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 SLC25A35Q3KQZ1 300 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 ACSM6Q6P461 480 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 SP7Q8TDD2 431 aaPredicted RBP16.86■□□□□ 0.29
SMPD3-201ENST00000219334 SEBOXQ9HB31 216 aaPredicted RBP16.86■□□□□ 0.29
SMPD3-201ENST00000219334 TNFRSF19Q9NS68 423 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 NUP205Q92621 2012 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 OPRK1P41145 380 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 FAM27D1Q5T7N8 215 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 MRGPREQ86SM8 312 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 OR4C16Q8NGL9 310 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 C20orf24Q9BUV8 137 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 TMEM147Q9BVK8 224 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 TRAPPC4Q9Y296 219 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 DOCK2Q92608 1830 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 DNAJC13O75165 2243 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 ID4P47928 161 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 AVPI1Q5T686 147 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 PRR27Q6MZM9 219 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 ZNF485Q8NCK3 441 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 SLC6A13Q9NSD5 602 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 FLVCR2Q9UPI3 526 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 COL22A1Q8NFW1 1626 aaPredicted RBP16.86■□□□□ 0.29
SMPD3-201ENST00000219334 AKAP11Q9UKA4 1901 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 LRP5O75197 1615 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 GABRB1P18505 474 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 TMEM128Q5BJH2 165 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 PMS2CLQ68D20 193 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 ICAM5Q9UMF0 924 aa16.86■□□□□ 0.29
SMPD3-201ENST00000219334 A0A1B0GVG6 124 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms