RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SPRY1O43609 319 aaPredicted RBP11.45□□□□□ -0.58
SCAF1-203ENST00000598359 PTBP3O95758 552 aaKnown RBP11.45□□□□□ -0.58
SCAF1-203ENST00000598359 GYPAP02724 150 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 HMGN1P05114 100 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 GSK3AP49840 483 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 UBA52P62987 128 aaKnown RBP11.45□□□□□ -0.58
SCAF1-203ENST00000598359 EFNB1P98172 346 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 GPR107Q5VW38 600 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 LRRN1Q6UXK5 716 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 AHSA2Q719I0 299 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 NLRC3Q7RTR2 1065 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 ANKRD13BQ86YJ7 626 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 OR8J1Q8NGP2 316 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 OR8S1Q8NH09 359 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 OTOSQ8NHW6 89 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 FAM216AQ8WUB2 273 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 RORBQ92753 470 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 GGHQ92820 318 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 TECTBQ96PL2 329 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 NUDT16L1Q9BRJ7 211 aaKnown RBP11.45□□□□□ -0.58
SCAF1-203ENST00000598359 SMURF1Q9HCE7 757 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 CLN6Q9NWW5 311 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 TVP23BQ9NYZ1 205 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 ENPP5Q9UJA9 477 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 RHBDD3Q9Y3P4 386 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.44□□□□□ -0.58
SCAF1-203ENST00000598359 EFCAB10A6NFE3 127 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 PSMD9O00233 223 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 ADAM20O43506 726 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 NOL3O60936 208 aaKnown RBP11.44□□□□□ -0.58
SCAF1-203ENST00000598359 FCN3O75636 299 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 INMTO95050 263 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 GABARAPO95166 117 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 FSTL3O95633 263 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 MRPL3P09001 348 aaKnown RBP11.44□□□□□ -0.58
SCAF1-203ENST00000598359 SLC2A5P22732 501 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 PSMB10P40306 273 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 SNAPC1Q16533 368 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 BTNL3Q6UXE8 466 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 SLC16A12Q6ZSM3 486 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 BCDIN3DQ7Z5W3 292 aaKnown RBP11.44□□□□□ -0.58
SCAF1-203ENST00000598359 FAM90A1Q86YD7 464 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.44□□□□□ -0.58
SCAF1-203ENST00000598359 C11orf53Q8IXP5 236 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 FGFRL1Q8N441 504 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 GCSAMQ8N6F7 178 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 GCDHQ92947 438 aaPredicted RBP11.44□□□□□ -0.58
SCAF1-203ENST00000598359 YIPF6Q96EC8 236 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 SEH1LQ96EE3 360 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 LYZL4Q96KX0 146 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 C1orf147Q96MC9 270 aaPredicted RBP11.44□□□□□ -0.58
SCAF1-203ENST00000598359 Q96MT0 163 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 JMJD8Q96S16 334 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 CDCA4Q9BXL8 241 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 TTTY10Q9BZA0 68 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 CCDC90BQ9GZT6 254 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 OR10A2Q9H208 303 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 OPA3Q9H6K4 179 aa11.44□□□□□ -0.58
SCAF1-203ENST00000598359 TRAV40A0A0B4J280 105 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 KIR2DS1A0A191URI9 304 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 MDFIC2A0A1B0GVS7 189 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 A0A1B0GW55 424 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 CCDC182A6NF36 153 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 OOEPA6NGQ2 149 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 PRR32B1ATL7 298 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 PHYHO14832 338 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 PRODHO43272 600 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 DUX4L2P0CJ85 424 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 DUX4L3P0CJ86 424 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 DUX4L4P0CJ87 422 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 DUX4L5P0CJ88 424 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 DUX4L6P0CJ89 424 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 DUX4L7P0CJ90 424 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 ACKR3P25106 362 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 CFPP27918 469 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 DDOSTP39656 456 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 GMFBP60983 142 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 FGF12P61328 243 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 MEDAGQ5VYS4 303 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 RNLSQ5VYX0 342 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 DUX4L9Q6RFH8 374 aaPredicted RBP11.43□□□□□ -0.58
SCAF1-203ENST00000598359 SPERTQ8NA61 448 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 PLPP7Q8NBV4 271 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 OR52H1Q8NGJ2 320 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 LRRC29Q8WV35 223 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 TAF15Q92804 592 aaKnown RBP eCLIP11.43□□□□□ -0.58
SCAF1-203ENST00000598359 FUNDC2Q9BWH2 189 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 PAPOLGQ9BWT3 736 aaKnown RBP11.43□□□□□ -0.58
SCAF1-203ENST00000598359 PRRG3Q9BZD7 231 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 MS4A7Q9GZW8 240 aaPredicted RBP11.43□□□□□ -0.58
SCAF1-203ENST00000598359 NAA50Q9GZZ1 169 aaKnown RBP11.43□□□□□ -0.58
SCAF1-203ENST00000598359 SP140LQ9H930 580 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 C14orf119Q9NWQ9 140 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 DUX4Q9UBX2 424 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 LRP12Q9Y561 859 aa11.43□□□□□ -0.58
SCAF1-203ENST00000598359 TMEM89A2RUT3 159 aa11.42□□□□□ -0.58
SCAF1-203ENST00000598359 TNFRSF13BO14836 293 aaPredicted RBP11.42□□□□□ -0.58
SCAF1-203ENST00000598359 PRKYO43930 277 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms