RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 SMURF1Q9HCE7 757 aa9.15□□□□□ -0.94
SHKBP1-206ENST00000595523 AMBNQ9NP70 447 aa9.15□□□□□ -0.94
SHKBP1-206ENST00000595523 ABCB9Q9NP78 766 aa9.15□□□□□ -0.94
SHKBP1-206ENST00000595523 SMPD3Q9NY59 655 aaPredicted RBP9.15□□□□□ -0.94
SHKBP1-206ENST00000595523 GNG8Q9UK08 70 aa9.15□□□□□ -0.94
SHKBP1-206ENST00000595523 MYRFQ9Y2G1 1151 aa9.15□□□□□ -0.94
SHKBP1-206ENST00000595523 ANK2Q01484 3957 aa9.15□□□□□ -0.95
SHKBP1-206ENST00000595523 A0A1B0GW55 424 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 A6NIN4 97 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 C22orf46C9J442 243 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 H3BSH0 61 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 RHBDL1O75783 438 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 CLIC3O95833 236 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 GYPAP02724 150 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 DUX4L2P0CJ85 424 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 DUX4L3P0CJ86 424 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 DUX4L4P0CJ87 422 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 DUX4L5P0CJ88 424 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 DUX4L6P0CJ89 424 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 DUX4L7P0CJ90 424 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 AMY2BP19961 511 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 NANOS3P60323 173 aaKnown RBP9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 GNB2P62879 340 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 ACTC1P68032 377 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 ACTA1P68133 377 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 SMN1Q16637 294 aaKnown RBP9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 ODF4Q2M2E3 257 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 CEACAM21Q3KPI0 293 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 DUX4L9Q6RFH8 374 aaPredicted RBP9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 FGFRL1Q8N441 504 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 WDR13Q9H1Z4 485 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 OR51I2Q9H344 312 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 DUX4Q9UBX2 424 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 OR5V1Q9UGF6 321 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 ENPP5Q9UJA9 477 aa9.14□□□□□ -0.95
SHKBP1-206ENST00000595523 TRAV38-1A0A0B4J264 116 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 IGHV2-70DA0A0C4DH43 119 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 DAPL1A0PJW8 107 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 ZNF732B4DXR9 585 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 CASQ2O14958 399 aaPredicted RBP9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 AKR7A2O43488 359 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 ADAM20O43506 726 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 MPZL2O60487 215 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 MTRF1O75570 445 aaKnown RBP9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 IGHA1P01876 353 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 OR12D2P58182 307 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 GABPB1Q06547 395 aaPredicted RBP9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 PAX8Q06710 450 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 KLF17Q5JT82 389 aaPredicted RBP9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 ZNF691Q5VV52 312 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 PLCXD3Q63HM9 321 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 KCTD8Q6ZWB6 473 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 MOB3CQ70IA8 216 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 DOK3Q7L591 496 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 NLRC3Q7RTR2 1065 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 THAP5Q7Z6K1 395 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 ACBD7Q8N6N7 88 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 PACRGLQ8N7B6 248 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 OR5A2Q8NGI9 324 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 OR10Z1Q8NGY1 313 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 OR2G2Q8NGZ5 317 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 PELI1Q96FA3 418 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 RASSF4Q9H2L5 321 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 TRIM36Q9NQ86 728 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 GPR173Q9NS66 373 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 MRPS18AQ9NVS2 196 aaKnown RBP9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 KAAG1Q9UBP8 84 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 CLN8Q9UBY8 286 aa9.13□□□□□ -0.95
SHKBP1-206ENST00000595523 LOC107986453A0A1B0GWG9 222 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 PQLC2LA1A4F0 135 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 OR5B21A6NL26 309 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 SNTNA6NMZ2 147 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 DHRS7CA6NNS2 312 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 NDUFA2O43678 99 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 NRASP01111 189 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 TFF1P04155 84 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 MUC1P15941 1255 aaPredicted RBP9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 EPHA1P21709 976 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 GMFBP60983 142 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 GNG3P63215 75 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 ADARB1P78563 741 aaKnown RBP9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 RAB40BQ12829 278 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 GALEQ14376 348 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 KCNJ8Q15842 424 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 TUSC1Q2TAM9 212 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 KRTAP24-1Q3LI83 254 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 CLVS2Q5SYC1 327 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 OGFRL1Q5TC84 451 aaPredicted RBP9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 STUMQ69YW2 141 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 FDX2Q6P4F2 183 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 FAM220AQ7Z4H9 259 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 LHFPL3Q86UP9 236 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 RDH10Q8IZV5 341 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 ZNF555Q8NEP9 628 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 OR5T2Q8NGG2 359 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 OR52I1Q8NGK6 324 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 CNIH3Q8TBE1 160 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 RAB40AQ8WXH6 277 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 AQP3Q92482 292 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 C4orf36Q96KX1 117 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms