RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 DAPL1A0PJW8 107 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 A6NIN4 97 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 SNTNA6NMZ2 147 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 SRRM5B3KS81 715 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 ZNF732B4DXR9 585 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 ADAM20O43506 726 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 MPZL2O60487 215 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 FCN3O75636 299 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 FSHBP01225 129 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 CCL1P22362 96 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 KIR3DL2P43630 455 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 GMFBP60983 142 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 KCNJ8Q15842 424 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 CEACAM21Q3KPI0 293 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 CDONQ4KMG0 1287 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 FAM76BQ5HYJ3 339 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 PLCXD3Q63HM9 321 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 WDR25Q64LD2 544 aaPredicted RBP13.08□□□□□ -0.32
LIG3-215ENST00000592690 Q6ZSR3 168 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 ITFG2Q969R8 447 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 DACT3Q96B18 629 aaPredicted RBP13.08□□□□□ -0.32
LIG3-215ENST00000592690 RDH12Q96NR8 316 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 HIST1H2AAQ96QV6 131 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 WDR13Q9H1Z4 485 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 SMURF1Q9HCE7 757 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 GPR173Q9NS66 373 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 METRNQ9UJH8 293 aa13.08□□□□□ -0.32
LIG3-215ENST00000592690 IGHV2-70DA0A0C4DH43 119 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 A0A1B0GW55 424 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 C22orf46C9J442 243 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 RHBDL1O75783 438 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 CLIC3O95833 236 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 NRASP01111 189 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 DUX4L2P0CJ85 424 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 DUX4L3P0CJ86 424 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 DUX4L4P0CJ87 422 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 DUX4L5P0CJ88 424 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 DUX4L6P0CJ89 424 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 DUX4L7P0CJ90 424 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 CFHR2P36980 270 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 OR12D2P58182 307 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 GNG3P63215 75 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 TMEM42Q69YG0 159 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 DUX4L9Q6RFH8 374 aaPredicted RBP13.07□□□□□ -0.32
LIG3-215ENST00000592690 DOK3Q7L591 496 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 ACBD7Q8N6N7 88 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 ZNF555Q8NEP9 628 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 OR10Z1Q8NGY1 313 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 Q96MT0 163 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 TECTBQ96PL2 329 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 OR51I2Q9H344 312 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 TRIM36Q9NQ86 728 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 DUX4Q9UBX2 424 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 MYRFQ9Y2G1 1151 aa13.07□□□□□ -0.32
LIG3-215ENST00000592690 A0A1B0GVI7 797 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 OR5B21A6NL26 309 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 DHRS7CA6NNS2 312 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 AKR7A2O43488 359 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 SYT7O43581 403 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 WBP4O75554 376 aaKnown RBP13.06□□□□□ -0.32
LIG3-215ENST00000592690 MUC1P15941 1255 aaPredicted RBP13.06□□□□□ -0.32
LIG3-215ENST00000592690 EPHA1P21709 976 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 NANOS3P60323 173 aaKnown RBP13.06□□□□□ -0.32
LIG3-215ENST00000592690 PAX8Q06710 450 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 SMN1Q16637 294 aaKnown RBP13.06□□□□□ -0.32
LIG3-215ENST00000592690 CLVS2Q5SYC1 327 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 LHFPL3Q86UP9 236 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 FGFRL1Q8N441 504 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 TEX29Q8N6K0 151 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 OR5T2Q8NGG2 359 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 OR5A2Q8NGI9 324 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 NANPQ8TBE9 248 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 CYGBQ8WWM9 190 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 RAB40AQ8WXH6 277 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 C4orf36Q96KX1 117 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 OCEL1Q9H607 264 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 ERVK-18Q9QC07 812 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 PCDHGB1Q9Y5G3 927 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 AUP1Q9Y679 476 aa13.06□□□□□ -0.32
LIG3-215ENST00000592690 COL6A5A8TX70 2615 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 LOC107986453A0A1B0GWG9 222 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 RNF212BA8MTL3 300 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 TMPRSS2O15393 492 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 NDUFA2O43678 99 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 RGS9O75916 674 aaPredicted RBP13.05□□□□□ -0.32
LIG3-215ENST00000592690 IGHA1P01876 353 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 TFF1P04155 84 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 AMY2BP19961 511 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 NPY4RP50391 375 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 GABPB1Q06547 395 aaPredicted RBP13.05□□□□□ -0.32
LIG3-215ENST00000592690 MICBQ29980 383 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 KRTAP24-1Q3LI83 254 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 ZNF691Q5VV52 312 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 HAGHLQ6PII5 290 aaPredicted RBP13.05□□□□□ -0.32
LIG3-215ENST00000592690 RDH10Q8IZV5 341 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 PACRGLQ8N7B6 248 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 FAM216BQ8N7L0 139 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 OR52I1Q8NGK6 324 aa13.05□□□□□ -0.32
LIG3-215ENST00000592690 OR2G2Q8NGZ5 317 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms