RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ZNF275Q9NSD4 429 aaPredicted RBP10.73□□□□□ -0.69
ERBB2-206ENST00000578373 GFOD1Q9NXC2 390 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 A0A087WZY1 265 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 NQO2P16083 231 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 CLDN15P56746 228 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 ZXDAP98168 799 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 Q7L0L9 218 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 LSMEM1Q8N8F7 131 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 OR11G2Q8NGC1 345 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 OR5AP2Q8NGF4 316 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 SPACA9Q96E40 222 aaPredicted RBP10.73□□□□□ -0.69
ERBB2-206ENST00000578373 PCDHGA9Q9Y5G4 932 aaKnown RBP10.73□□□□□ -0.69
ERBB2-206ENST00000578373 A0A1W2PP11 408 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 CXCL2P19875 107 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 ZP3P21754 424 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 TLE4Q04727 773 aa10.73□□□□□ -0.69
ERBB2-206ENST00000578373 CADP27708 2225 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 GSTP1P09211 210 aaKnown RBP10.72□□□□□ -0.69
ERBB2-206ENST00000578373 VSIG10L2P0DP72 767 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 CD46P15529 392 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 HIST1H1DP16402 221 aaKnown RBP10.72□□□□□ -0.69
ERBB2-206ENST00000578373 GPR3P46089 330 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 DEFA6Q01524 100 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 SPICQ8N5J4 248 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 TMEM104Q8NE00 496 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 IFI44Q8TCB0 444 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 ASB5Q8WWX0 329 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 ISOC2Q96AB3 205 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 RPUSD4Q96CM3 377 aaKnown RBP10.72□□□□□ -0.69
ERBB2-206ENST00000578373 CCDC74BQ96LY2 380 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 GPR160Q9UJ42 338 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 ZMIZ1Q9ULJ6 1067 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 FREM3P0C091 2139 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 DEGS1O15121 323 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 PTGER4P35408 488 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 FLI1Q01543 452 aaPredicted RBP10.72□□□□□ -0.69
ERBB2-206ENST00000578373 PLGLAQ15195 96 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 OR10J5Q8NHC4 309 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 MCHR2Q969V1 340 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 PHF7Q9BWX1 381 aaPredicted RBP10.72□□□□□ -0.69
ERBB2-206ENST00000578373 PATZ1Q9HBE1 687 aaKnown RBP10.72□□□□□ -0.69
ERBB2-206ENST00000578373 KPTNQ9Y664 436 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 R4GN57 208 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 C7orf66A4D0T2 115 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 RNASEK-C17orf49H0YIS7 233 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 PPP1R2P9O14990 202 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 SHOXO15266 292 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 PIN1P1O15428 100 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 ARL3P36405 182 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 SSTP61278 116 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 PMP22Q01453 160 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 INPP5JQ15735 1006 aaPredicted RBP10.72□□□□□ -0.69
ERBB2-206ENST00000578373 ZNF774Q6NX45 483 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 TFAP2EQ6VUC0 442 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 ADGRG3Q86Y34 549 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 APH1AQ96BI3 265 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 ZNF764Q96H86 408 aaPredicted RBP10.72□□□□□ -0.69
ERBB2-206ENST00000578373 HEYLQ9NQ87 328 aaPredicted RBP10.72□□□□□ -0.69
ERBB2-206ENST00000578373 LCTP09848 1927 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 A0A1W2PR80 420 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 LILRA5A6NI73 299 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 MPPED1O15442 326 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 TIMM8AO60220 97 aaPredicted RBP10.72□□□□□ -0.69
ERBB2-206ENST00000578373 VAMP5O95183 116 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 THY1P04216 161 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 PTGFRP43088 359 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 MIDNQ504T8 468 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 NOXO1Q8NFA2 376 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 PGLYRP3Q96LB9 341 aa10.72□□□□□ -0.69
ERBB2-206ENST00000578373 INTS1Q8N201 2190 aaKnown RBP10.71□□□□□ -0.69
ERBB2-206ENST00000578373 A0A0B4J293 547 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 IL11P20809 199 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 HNF1AP20823 631 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 AADACP22760 399 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 LIMK1P53667 647 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 MSMO1Q15800 293 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 ARSJQ5FYB0 599 aaPredicted RBP10.71□□□□□ -0.69
ERBB2-206ENST00000578373 C17orf78Q8N4C9 275 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 PTPMT1Q8WUK0 201 aaPredicted RBP10.71□□□□□ -0.69
ERBB2-206ENST00000578373 MITD1Q8WV92 249 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 INTS12Q96CB8 462 aaKnown RBP10.71□□□□□ -0.69
ERBB2-206ENST00000578373 TIMM10BQ9Y5J6 103 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 ANKUB1A6NFN9 424 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 LMX1BO60663 402 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 SFTA3P0C7M3 94 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 SRFP11831 508 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 SNRPEP62304 92 aaKnown RBP10.71□□□□□ -0.69
ERBB2-206ENST00000578373 INSM1Q01101 510 aaPredicted RBP10.71□□□□□ -0.69
ERBB2-206ENST00000578373 FZD5Q13467 585 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 ZNF239Q16600 458 aaKnown RBP10.71□□□□□ -0.69
ERBB2-206ENST00000578373 CDC20BQ86Y33 519 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 ADAD2Q8NCV1 583 aaKnown RBP10.71□□□□□ -0.69
ERBB2-206ENST00000578373 DEFB108BQ8NET1 73 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 PILRAQ9UKJ1 303 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 RPH3ALQ9UNE2 315 aa10.71□□□□□ -0.69
ERBB2-206ENST00000578373 CHD5Q8TDI0 1954 aa10.71□□□□□ -0.7
ERBB2-206ENST00000578373 MT-CO2P00403 227 aa10.71□□□□□ -0.7
ERBB2-206ENST00000578373 HBG1P69891 147 aa10.71□□□□□ -0.7
ERBB2-206ENST00000578373 HBG2P69892 147 aa10.71□□□□□ -0.7
ERBB2-206ENST00000578373 SKP2Q13309 424 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms