RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 A0A1W2PPE2 198 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 A0A1W2PR64 198 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 A0A1W2PRV1 198 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 ACOT8O14734 319 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 ALX3O95076 343 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 NCK1P16333 377 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 RRM2P31350 389 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 GSK3AP49840 483 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 MRPS15P82914 257 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 MXRA7P84157 204 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 EGR3Q06889 387 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 ZNF826PQ6ZT77 177 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 PRSS45Q7RTY3 260 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 WDR86Q86TI4 376 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 Q8N2B8 174 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 OR2T6Q8NHC8 308 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 SGK3Q96BR1 496 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 NSMCE2Q96MF7 247 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 GAFA1Q96PS6 74 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 DGCR6LQ9BY27 220 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 HEXA-AS1Q9H8Q6 139 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 SCPEP1Q9HB40 452 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 GMPR2Q9P2T1 348 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 SLC25A10Q9UBX3 287 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 A0A1B0GVG6 124 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 ZNF593O00488 134 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 GLCEO94923 617 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 SPARCP09486 303 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 SAA4P35542 130 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 SAMD4BQ5PRF9 694 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 CRIP3Q6Q6R5 217 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 OR52J3Q8NH60 311 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 ANGPTL6Q8NI99 470 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 FAM110DQ8TAY7 271 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 OR5P3Q8WZ94 311 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 FOXRED1Q96CU9 486 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 ITPKCQ96DU7 683 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 MYLK2Q9H1R3 596 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 MUC13Q9H3R2 512 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 FN3KQ9H479 309 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 DNAJB11Q9UBS4 358 aa9.18□□□□□ -0.94
SMARCE1-214ENST00000578112 A6NHS1 94 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 RBP4P02753 201 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 ALDOBP05062 364 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 SPI1P17947 270 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 PYCR1P32322 319 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 IGSF11Q5DX21 431 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 SLC35E4Q6ICL7 350 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 CD300LDQ6UXZ3 194 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 NDUFA11Q86Y39 141 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 OR2T33Q8NG76 320 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 ZNF671Q8TAW3 534 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 SDSLQ96GA7 329 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 AJUBAQ96IF1 538 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 CLPTM1LQ96KA5 538 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 INTS14Q96SY0 518 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 AIFM2Q9BRQ8 373 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 MAGIXQ9H6Y5 334 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 TBC1D23Q9NUY8 699 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 NECAP2Q9NVZ3 263 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 NLKQ9UBE8 527 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 IGHV3OR15-7A0A075B7D8 119 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 PIN1P1O15428 100 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 TBX1O43435 398 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 DNAJC8O75937 253 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 ANXA2P07355 339 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 HOXB6P17509 224 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 PRKXP51817 358 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 PGAM4Q8N0Y7 254 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 FAM216BQ8N7L0 139 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 OR4F17Q8NGA8 305 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 OR4F4Q96R69 305 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 CENPMQ9NSP4 180 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 TBL2Q9Y4P3 447 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 TRRAPQ9Y4A5 3859 aa9.17□□□□□ -0.94
SMARCE1-214ENST00000578112 DHRS12A0PJE2 317 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 MEIOCA2RUB1 952 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 OR5B21A6NL26 309 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 RIIAD1A6NNX1 92 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 PFDN1O60925 122 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 OPRL1P41146 370 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 MAGEA2P43356 314 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 DYNLT3P51808 116 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 LOXL3P58215 753 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 SF3A3Q12874 501 aaKnown RBP eCLIP9.16□□□□□ -0.945e-6■■■■■ 39.5
SMARCE1-214ENST00000578112 EIF2B1Q14232 305 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 MZT2BQ6NZ67 158 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 HIST1H2AAQ96QV6 131 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 PAPOLGQ9BWT3 736 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 PPA2Q9H2U2 334 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 CMC2Q9NRP2 79 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 ARRDC5A6NEK1 342 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 TVP23AA6NH52 213 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 CCNB2O95067 398 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 AMY2BP19961 511 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 GSTT1P30711 240 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 CBX5P45973 191 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 KLHL12Q53G59 568 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 LINC01590Q5TEZ4 76 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 ZNF770Q6IQ21 691 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms