RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 SSMEM1Q8WWF3 244 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 ST8SIA4Q92187 359 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 TMIGD2Q96BF3 282 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 C12orf43Q96C57 262 aaKnown RBP6.67□□□□□ -1.34
TRAF3-205ENST00000558700 FAM71F1Q96KD3 344 aaPredicted RBP6.67□□□□□ -1.34
TRAF3-205ENST00000558700 WDFY2Q96P53 400 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 CCT8L2Q96SF2 557 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 TBX15Q96SF7 602 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 FEVQ99581 238 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 MICU1Q9BPX6 476 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 TEX12Q9BXU0 123 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 SIRPDQ9H106 197 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 SLITRK2Q9H156 845 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 OR51V1Q9H2C8 321 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 NIPAL2Q9H841 368 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 MED20Q9H944 212 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 ACOXLQ9NUZ1 547 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 ZNF391Q9UJN7 358 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 MMP24Q9Y5R2 645 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 MPC1Q9Y5U8 109 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 KPTNQ9Y664 436 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 IGHV3OR15-7A0A075B7D8 119 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 IGHV1-69DA0A0B4J2H0 117 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 A0A1B0GVI7 797 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 TMEM210A6NLX4 147 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 TNFRSF13BO14836 293 aaPredicted RBP6.66□□□□□ -1.34
TRAF3-205ENST00000558700 SELENOFO60613 162 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 KNG1P01042 644 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 LHBP01229 141 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 IGHV1-69P01742 117 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 MELTFP08582 738 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 FAHP16930 419 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 MDKP21741 143 aaPredicted RBP6.66□□□□□ -1.34
TRAF3-205ENST00000558700 POU1F1P28069 291 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 PEX2P28328 305 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 RAG2P55895 527 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 RPS7P62081 194 aaKnown RBP6.66□□□□□ -1.34
TRAF3-205ENST00000558700 CSNK2BP67870 215 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 MS4A2Q01362 244 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 FLOT2Q14254 428 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 DNAL1Q4LDG9 190 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 WDR38Q5JTN6 314 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 SLC35D3Q5M8T2 416 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 FIP1L1Q6UN15 594 aaKnown RBP6.66□□□□□ -1.34
TRAF3-205ENST00000558700 WDR82Q6UXN9 313 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 Q6YL49 198 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 BTN2A1Q7KYR7 527 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 PRSS45Q7RTY3 260 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 PAPD5Q8NDF8 572 aaKnown RBP6.66□□□□□ -1.34
TRAF3-205ENST00000558700 OTOSQ8NHW6 89 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 FAM81AQ8TBF8 368 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 THEM6Q8WUY1 208 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 DNAJC9Q8WXX5 260 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 SGK3Q96BR1 496 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 FOXRED1Q96CU9 486 aaPredicted RBP6.66□□□□□ -1.34
TRAF3-205ENST00000558700 ADI1Q9BV57 179 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 CHID1Q9BWS9 393 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 DNTTIP1Q9H147 329 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 TLNRD1Q9H1K6 362 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 C1orf21Q9H246 121 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 YY1AP1Q9H869 796 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 BEX1Q9HBH7 125 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 PDP1Q9P0J1 537 aaPredicted RBP6.66□□□□□ -1.34
TRAF3-205ENST00000558700 ONECUT1Q9UBC0 465 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 DNAJB11Q9UBS4 358 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 RPUSD1Q9UJJ7 312 aaKnown RBP6.66□□□□□ -1.34
TRAF3-205ENST00000558700 CAB39Q9Y376 341 aaPredicted RBP6.66□□□□□ -1.34
TRAF3-205ENST00000558700 RHBDD3Q9Y3P4 386 aa6.66□□□□□ -1.34
TRAF3-205ENST00000558700 SOX21Q9Y651 276 aaPredicted RBP6.66□□□□□ -1.34
TRAF3-205ENST00000558700 CENPVL3A0A0U1RRI6 287 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 BTBD17A6NE02 478 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 FAM181BA6NEQ2 426 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.65□□□□□ -1.34
TRAF3-205ENST00000558700 ACOT8O14734 319 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 CDIPTO14735 213 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 NDUFB3O43676 98 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 NDUFA7O95182 113 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 HMGN1P05114 100 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 ANXA8P13928 327 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 OMGP23515 440 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 ARF6P62330 175 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 PRDX4Q13162 271 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 GINS1Q14691 196 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 CDONQ4KMG0 1287 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 KLHL12Q53G59 568 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 LRRC10Q5BKY1 277 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 LCN1P1Q5VSP4 162 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 STUMQ69YW2 141 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 PLBD1Q6P4A8 553 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 C17orf107Q6ZR85 190 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 KCTD8Q6ZWB6 473 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 VMO1Q7Z5L0 202 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 KRT77Q7Z794 578 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 LDLRAD3Q86YD5 345 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 ZDHHC23Q8IYP9 409 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 GALNT4Q8N4A0 578 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 FAM216BQ8N7L0 139 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 OR10Z1Q8NGY1 313 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 TBC1D15Q8TC07 691 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 CANT1Q8WVQ1 401 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms