RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 C3orf36Q3SXR2 165 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 SLC22A6Q4U2R8 563 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 TIMM23BQ5SRD1 257 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 MTFR2Q6P444 385 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 FBXW12Q6X9E4 464 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 MRGPRGQ86SM5 289 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 C1orf174Q8IYL3 243 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 ZDHHC23Q8IYP9 409 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 ACBD4Q8NC06 268 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 OR56B1Q8NGI3 324 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 OR5D18Q8NGL1 313 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 OR10R2Q8NGX6 335 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 GCDHQ92947 438 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-233ENST00000557529 PPP1R14BQ96C90 147 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 WBP1Q96G27 269 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 HIST1H2AAQ96QV6 131 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 GAL3ST1Q99999 423 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 USB1Q9BQ65 265 aaKnown RBP10.76□□□□□ -0.69
SHMT2-233ENST00000557529 METTL9Q9H1A3 318 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 LPAR5Q9H1C0 372 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 PCDHB16Q9NRJ7 776 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 ZNF629Q9UEG4 869 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-233ENST00000557529 MPC1Q9Y5U8 109 aa10.76□□□□□ -0.69
SHMT2-233ENST00000557529 FRYQ5TBA9 3013 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 ANKRD20A5PA0PJZ0 165 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 CSF1P09603 554 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 FAM157BP0CG42 384 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 SELEP16581 610 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 RAD52P43351 418 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 VEGFCP49767 419 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 SNTB2Q13425 540 aaKnown RBP10.75□□□□□ -0.69
SHMT2-233ENST00000557529 DMRTC1Q5HYR2 192 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 TMEM211Q6ICI0 200 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 ASCL4Q6XD76 172 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 MYPOPQ86VE0 399 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-233ENST00000557529 CHST4Q8NCG5 386 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 TMEM104Q8NE00 496 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 PXT1Q8NFP0 134 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 GPX8Q8TED1 209 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 AQP3Q92482 292 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 DPAGT1Q9H3H5 408 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 POFUT1Q9H488 388 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 PRORYQ9H606 182 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 ELL3Q9HB65 397 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-233ENST00000557529 COPZ2Q9P299 210 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 KLK11Q9UBX7 282 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 GPR160Q9UJ42 338 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 TINAGQ9UJW2 476 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 SLC25A15Q9Y619 301 aa10.75□□□□□ -0.69
SHMT2-233ENST00000557529 IGKV1-27A0A075B6S5 117 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 A0A0G2JNJ9 132 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 PQLC2LA1A4F0 135 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 MEIOCA2RUB1 952 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 A8MXE2 369 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 AGFG2O95081 481 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 MELTFP08582 738 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 GSTP1P09211 210 aaKnown RBP10.74□□□□□ -0.69
SHMT2-233ENST00000557529 CECR9P0C854 216 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 PTHLHP12272 177 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 ZNF35P13682 527 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 RAC2P15153 192 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 MGMTP16455 207 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 BMP5P22003 454 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 CPT2P23786 658 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 FAUP35544 74 aaKnown RBP10.74□□□□□ -0.69
SHMT2-233ENST00000557529 CASP6P55212 293 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 UCP2P55851 309 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 ARL6IP1Q15041 203 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 RSU1Q15404 277 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 CEACAM21Q3KPI0 293 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 MOGAT2Q3SYC2 334 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 ZNF260Q3ZCT1 412 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 CDNFQ49AH0 187 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 OLFML2AQ68BL7 652 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 C1QL2Q7Z5L3 287 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 FAM89BQ8N5H3 189 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 CELF2-AS1Q8N7Q2 184 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 ZSCAN4Q8NAM6 433 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-233ENST00000557529 OR5A2Q8NGI9 324 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 CREB3L1Q96BA8 519 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 MUCL1Q96DR8 90 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 SEH1LQ96EE3 360 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 TM2D1Q9BX74 207 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 C1QTNF6Q9BXI9 259 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 BCL2L14Q9BZR8 327 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 MMP28Q9H239 520 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 OR51B6Q9H340 312 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 BANF2Q9H503 90 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 ELOVL5Q9NYP7 299 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 IL36GQ9NZH8 169 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 NLKQ9UBE8 527 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 Q9UFV3 132 aa10.74□□□□□ -0.69
SHMT2-233ENST00000557529 ZNF107Q9UII5 783 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-233ENST00000557529 NOP16Q9Y3C1 178 aaKnown RBP10.74□□□□□ -0.69
SHMT2-233ENST00000557529 INTS1Q8N201 2190 aaKnown RBP10.74□□□□□ -0.69
SHMT2-233ENST00000557529 CELSR3Q9NYQ7 3312 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 MGAQ8IWI9 3026 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 LOC400499M0QZD8 3231 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 OR5B21A6NL26 309 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 EEF1E1-BLOC1S5C9J1V9 151 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms