RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 Q6ZSR6 202 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 STK40Q8N2I9 435 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 OR2Z1Q8NG97 314 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 OR10Z1Q8NGY1 313 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 OR52N1Q8NH53 320 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 TMEM234Q8WY98 164 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 ZNF649Q9BS31 505 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 TMEM175Q9BSA9 504 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 ARV1Q9H2C2 271 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 FBXO44Q9H4M3 255 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 FANCEQ9HB96 536 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 KLF12Q9Y4X4 402 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 ZNF608Q9ULD9 1512 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-218ENST00000556256 JCADQ9P266 1359 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 IGKV1-6A0A0C4DH72 117 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 A0A1W2PRF3 423 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 A0A1W2PRM7 423 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 CENPXA8MT69 81 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 VGLL3A8MV65 326 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 CENPBD1B2RD01 187 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 GCGP01275 180 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 RPN2P04844 631 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 MPV17P39210 176 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 IDH2P48735 452 aaKnown RBP1.43□□□□□ -2.18
SCFD1-218ENST00000556256 ERFP50548 548 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 BCAP31P51572 246 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 PSMD4P55036 377 aaKnown RBP1.43□□□□□ -2.18
SCFD1-218ENST00000556256 PAFAH1B2P68402 229 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 LINC00303Q3SY05 128 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 KLHL12Q53G59 568 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 MLIPQ5VWP3 458 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 MED27Q6P2C8 311 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 MORN3Q6PF18 240 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-218ENST00000556256 VTCN1Q7Z7D3 282 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 FAM184AQ8NB25 1140 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 OR5T3Q8NGG3 340 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 OR5M1Q8NGP8 315 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 SFXN5Q8TD22 340 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 TCP10LQ8TDR4 215 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 TFGQ92734 400 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-218ENST00000556256 RHOXF2Q9BQY4 288 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 MARVELD1Q9BSK0 173 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 FRMD8P1Q9BZ68 369 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-218ENST00000556256 CHRNA10Q9GZZ6 450 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 DHX35Q9H5Z1 703 aaKnown RBP1.43□□□□□ -2.18
SCFD1-218ENST00000556256 ARMC7Q9H6L4 198 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 CSNK1G1Q9HCP0 422 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 DYRK4Q9NR20 520 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 CHRAC1Q9NRG0 131 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 CA10Q9NS85 328 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 TAS2R5Q9NYW4 299 aa1.43□□□□□ -2.18
SCFD1-218ENST00000556256 DHCR7Q9UBM7 475 aaKnown RBP1.43□□□□□ -2.18
SCFD1-218ENST00000556256 NDRG2Q9UN36 371 aaKnown RBP1.43□□□□□ -2.18
SCFD1-218ENST00000556256 CHTOPQ9Y3Y2 248 aaKnown RBP1.43□□□□□ -2.18
SCFD1-218ENST00000556256 KIF27Q86VH2 1401 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 TSPOAP1O95153 1857 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 IGHV2OR16-5A0A0B4J2B6 119 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 ZNF233A6NK53 670 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 DFFAO00273 331 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 POLR1CO15160 346 aaPredicted RBP1.42□□□□□ -2.18
SCFD1-218ENST00000556256 KDELR3O43731 214 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 TRAPPC6AO75865 159 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 SMC2O95347 1197 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 IGKV1-39P01597 117 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 IGKV1D-39P04432 117 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 MMP7P09237 267 aaPredicted RBP1.42□□□□□ -2.18
SCFD1-218ENST00000556256 SLC35G6P0C7Q6 338 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 CD28P10747 220 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 GNRHRP30968 328 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 PRSS3P35030 304 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 ARL2P36404 184 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 GDI2P50395 445 aaKnown RBP1.42□□□□□ -2.18
SCFD1-218ENST00000556256 HCCSP53701 268 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 SLC35A1P78382 337 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 CPTPQ5TA50 214 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 FAM104BQ5XKR9 115 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 TBPL2Q6SJ96 375 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 SLC7A5P1Q8MH63 180 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 ORMDL3Q8N138 153 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 ZCCHC24Q8N2G6 241 aaKnown RBP1.42□□□□□ -2.18
SCFD1-218ENST00000556256 RNF10Q8N5U6 811 aaKnown RBP1.42□□□□□ -2.18
SCFD1-218ENST00000556256 ZNF321PQ8N8H1 164 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 FBXO36Q8NEA4 188 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 SLC26A10Q8NG04 563 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 OR2M7Q8NG81 312 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 OR4M2Q8NGB6 313 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 OR1S1Q8NH92 325 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 KIAA1143Q96AT1 154 aaPredicted RBP1.42□□□□□ -2.18
SCFD1-218ENST00000556256 SNF8Q96H20 258 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 GPR82Q96P67 336 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 ALS2CR12Q96Q35 445 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 NAPGQ99747 312 aaPredicted RBP1.42□□□□□ -2.18
SCFD1-218ENST00000556256 GABRG3Q99928 467 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 ANP32EQ9BTT0 268 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 CHID1Q9BWS9 393 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 STMN4Q9H169 189 aaPredicted RBP1.42□□□□□ -2.18
SCFD1-218ENST00000556256 KIR3DX1Q9H7L2 352 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 SND1-IT1Q9HBX3 110 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 TMEM100Q9NV29 134 aa1.42□□□□□ -2.18
SCFD1-218ENST00000556256 ADA2Q9NZK5 511 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms