RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 OR2T33Q8NG76 320 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 OR4C15Q8NGM1 316 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 OR5K1Q8NHB7 308 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF519Q8TB69 540 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 SYNPRQ8TBG9 265 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 THEM6Q8WUY1 208 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 SLC7A6Q92536 515 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 STMN2Q93045 179 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 SLCO4A1Q96BD0 722 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 ABHD1Q96SE0 405 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 PITX2Q99697 317 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 FOXC2Q99958 501 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 SLC25A33Q9BSK2 321 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 TMEM204Q9BSN7 226 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 TRAF4Q9BUZ4 470 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-220ENST00000553491 PLA2G12AQ9BZM1 189 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 OR2H1Q9GZK4 316 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 RAB1BQ9H0U4 201 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 TPK1Q9H3S4 243 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 POLE4Q9NR33 117 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 CA10Q9NS85 328 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 PLEK2Q9NYT0 353 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 TVP23BQ9NYZ1 205 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 TAAR3PQ9P1P4 343 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 KLHL21Q9UJP4 597 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 FBXL3Q9UKT7 428 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 UGT2A1Q9Y4X1 527 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 ORC6Q9Y5N6 252 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 CDH10Q9Y6N8 788 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 TANC2Q9HCD6 1990 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 ADGRG4Q8IZF6 3080 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 hDV102S1A0JD36 115 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 PLSCR5A0PG75 271 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 TRIM64A6NGJ6 449 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 TRIM64BA6NI03 449 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 F5H5K5 113 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 LYNX1G3V0Z9 82 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 H0YHG0 523 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 DCTN6O00399 190 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF593O00488 134 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 RER1O15258 196 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 TIMM8AO60220 97 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 GPRIN2O60269 458 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 CLPTM1O96005 669 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 IGKV3-15P01624 115 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 IGLV1-44P01699 117 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 HMGN1P05114 100 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 DANCRP0C864 163 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 LYNX1P0DP58 116 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 CLUP10909 449 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 FCGR1AP12314 374 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF35P13682 527 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 MMP9P14780 707 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF3P17036 446 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 HOXB6P17509 224 aaKnown RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 C21orf33P30042 268 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 GLRXP35754 106 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 RPS27P42677 84 aaKnown RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ALDH3B1P43353 468 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 MAGEA2P43356 314 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 DAPP51397 102 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 CRISP1P54107 249 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 FXYD6P3P58550 94 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ERVS71-1P61550 626 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 PPP1CBP62140 327 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 RPS23P62266 143 aaKnown RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 SCRN3Q0VDG4 424 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 CRMP1Q14194 572 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 EIF2B1Q14232 305 aaKnown RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ENDOGQ14249 297 aaKnown RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 MAD2L1BPQ15013 274 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 C1QTNF12Q5T7M4 302 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 SHEQ5VZ18 495 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF770Q6IQ21 691 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ACSM5Q6NUN0 579 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF544Q6NX49 715 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 SLC27A4Q6P1M0 643 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 PLBD1Q6P4A8 553 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 SHQ1Q6PI26 577 aaKnown RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 CLEC2AQ6UVW9 174 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 UNQ6126/PRO20091Q6UXV3 157 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF620Q6ZNG0 422 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 KRT74Q7RTS7 529 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 FAM122BQ7Z309 247 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ADCK1Q86TW2 530 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 HIPK1Q86Z02 1210 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 TGIF2LYQ8IUE0 185 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ERI1Q8IV48 349 aaKnown RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 SLC37A3Q8NCC5 494 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 NPEPL1Q8NDH3 523 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 CSNK2A3Q8NEV1 391 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 OR2AK2Q8NG84 335 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 OR8D4Q8NGM9 314 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 OR2T4Q8NH00 348 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 OR4Q3Q8NH05 313 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 OR1F12Q8NHA8 337 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 SLC25A40Q8TBP6 338 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 NABP1Q96AH0 204 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms