RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 RIPPLY1Q0D2K3 151 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 STUMQ69YW2 141 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 USP43Q70EL4 1123 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 NLRC3Q7RTR2 1065 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 OR10H4Q8NGA5 316 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 OR5A2Q8NGI9 324 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 UPRTQ96BW1 309 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 C12orf43Q96C57 262 aaKnown RBP16■□□□□ 0.15
PTCH1-227ENST00000553256 LGALS12Q96DT0 336 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 RNF170Q96K19 258 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 WDR13Q9H1Z4 485 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 TRIM36Q9NQ86 728 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 IMPAD1Q9NX62 359 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 CLN8Q9UBY8 286 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 OR5V1Q9UGF6 321 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 ORC6Q9Y5N6 252 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 AUP1Q9Y679 476 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 IGHV3OR15-7A0A075B7D8 119 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 A0A0A6YYJ9 748 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 LOC100130705A0A1B0GUX0 176 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 P2RY10O00398 339 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 TCF21O43680 179 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 RHBDL1O75783 438 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 KRT8P05787 483 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 KIR3DL2P43630 455 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 TGM4P49221 684 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 NPY4RP50391 375 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 KCNJ8Q15842 424 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 DMRTC1Q5HYR2 192 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 WDR38Q5JTN6 314 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 BCL2L15Q5TBC7 163 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 FDX2Q6P4F2 183 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 FGFRL1Q8N441 504 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 BOLLQ8N9W6 283 aaKnown RBP15.99■□□□□ 0.15
PTCH1-227ENST00000553256 RNFT2Q96EX2 444 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 ACOXLQ9NUZ1 547 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 MRPS18AQ9NVS2 196 aaKnown RBP15.99■□□□□ 0.15
PTCH1-227ENST00000553256 PIGLQ9Y2B2 252 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 GMPPBQ9Y5P6 360 aa15.99■□□□□ 0.15
PTCH1-227ENST00000553256 hCG_1807616A0A1W2PRN6 198 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 ADAM20O43506 726 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 RPP14O95059 124 aaKnown RBP15.98■□□□□ 0.15
PTCH1-227ENST00000553256 MMP9P14780 707 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 GPM6AP51674 278 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 HILS1P60008 231 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 GNG3P63215 75 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 ZNF91Q05481 1191 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 C11orf91Q3C1V1 193 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 CEP78Q5JTW2 689 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 YIPF7Q8N8F6 280 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 AQP3Q92482 292 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 RDH12Q96NR8 316 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 NUDT16L1Q9BRJ7 211 aaKnown RBP15.98■□□□□ 0.15
PTCH1-227ENST00000553256 RASSF4Q9H2L5 321 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 ENPP5Q9UJA9 477 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 ZNF222Q9UK12 451 aa15.98■□□□□ 0.15
PTCH1-227ENST00000553256 PQLC2LA1A4F0 135 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 OR5B21A6NL26 309 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 ZNF732B4DXR9 585 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 WBP4O75554 376 aaKnown RBP15.97■□□□□ 0.15
PTCH1-227ENST00000553256 PLATP00750 562 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 IGHA1P01876 353 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 NANOS3P60323 173 aaKnown RBP15.97■□□□□ 0.15
PTCH1-227ENST00000553256 ZSCAN26Q16670 478 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 TP53I3Q53FA7 332 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 C9orf139Q6ZV77 190 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 DOK3Q7L591 496 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 ANGPTL6Q8NI99 470 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 ESM1Q9NQ30 184 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 ZNF69Q9UC07 566 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 MYRFQ9Y2G1 1151 aa15.97■□□□□ 0.15
PTCH1-227ENST00000553256 TENM1Q9UKZ4 2725 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 MTRF1O75570 445 aaKnown RBP15.96■□□□□ 0.15
PTCH1-227ENST00000553256 NRASP01111 189 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 IGHV4-38-2P0DP08 117 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 DBTP11182 482 aaKnown RBP15.96■□□□□ 0.15
PTCH1-227ENST00000553256 MPZP25189 248 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 OR12D2P58182 307 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 MICBQ29980 383 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 CLVS2Q5SYC1 327 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 ZNF788Q6ZQV5 615 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 LY6G5BQ8NDX9 201 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 CCL13Q99616 98 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 SLC6A7Q99884 636 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 C19orf24Q9BVV8 132 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 DNTTIP1Q9H147 329 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 SMPD3Q9NY59 655 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-227ENST00000553256 ERVK-18Q9QC07 812 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 NUP50Q9UKX7 468 aa15.96■□□□□ 0.15
PTCH1-227ENST00000553256 DVL1O14640 695 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 AKR7A2O43488 359 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 NOS1APO75052 506 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-227ENST00000553256 ACTC1P68032 377 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 ACTA1P68133 377 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 MOB3CQ70IA8 216 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 KCTD20Q7Z5Y7 419 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 BCL6BQ8N143 479 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-227ENST00000553256 ACBD7Q8N6N7 88 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 FAM216BQ8N7L0 139 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 ZDHHC22Q8N966 263 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms