RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 HDGFL3Q9Y3E1 203 aa13.4□□□□□ -0.26
CNN3-207ENST00000545882 A0A1W2PQM1 296 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 NUDT19A8MXV4 375 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 F8W036 122 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 ONECUT2O95948 504 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 THBS4P35443 961 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 LSM6P62312 80 aaKnown RBP13.39□□□□□ -0.27
CNN3-207ENST00000545882 BLOC1S1P78537 153 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 SPEM2Q0P670 501 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 DHRS7BQ6IAN0 325 aaPredicted RBP13.39□□□□□ -0.27
CNN3-207ENST00000545882 SLC16A14Q7RTX9 510 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 CBLN2Q8IUK8 224 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 SLC22A8Q8TCC7 542 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 NABP1Q96AH0 204 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 CNTNAP3BQ96NU0 1288 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 PLA2G2EQ9NZK7 142 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 DNAJB11Q9UBS4 358 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 NDRG3Q9UGV2 375 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 CHCHD2Q9Y6H1 151 aaPredicted RBP13.39□□□□□ -0.27
CNN3-207ENST00000545882 PI4KAP42356 2102 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 HOXB5P09067 269 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 FAHP16930 419 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 SERPINA2P20848 420 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 ADH6P28332 368 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 ZNF84P51523 738 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 TAS2R46P59540 309 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 SLC35A1P78382 337 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 H3F3AP84243 136 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 PJVKQ0ZLH3 352 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 PRAMEF20Q5VT98 475 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 Q6ZSR3 168 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 LINC00518Q8N0U6 118 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 PNLDC1Q8NA58 520 aaKnown RBP13.39□□□□□ -0.27
CNN3-207ENST00000545882 SLC25A43Q8WUT9 341 aaPredicted RBP13.39□□□□□ -0.27
CNN3-207ENST00000545882 EMG1Q92979 244 aaKnown RBP13.39□□□□□ -0.27
CNN3-207ENST00000545882 TMEM54Q969K7 222 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 CRB3Q9BUF7 120 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 ZNF160Q9HCG1 818 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 OR2S2Q9NQN1 319 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 GHRLQ9UBU3 117 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 LPAR3Q9UBY5 353 aa13.39□□□□□ -0.27
CNN3-207ENST00000545882 MCTS1Q9ULC4 181 aaKnown RBP13.39□□□□□ -0.27
CNN3-207ENST00000545882 KLF2Q9Y5W3 355 aaPredicted RBP13.39□□□□□ -0.27
CNN3-207ENST00000545882 TNRC18O15417 2968 aaPredicted RBP13.38□□□□□ -0.27
CNN3-207ENST00000545882 LY6G6EA0A0G2JKS1 128 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 A0A0U1RQV5 110 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 FIGNL2A6NMB9 653 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 ZNF705EA8MWA4 302 aaPredicted RBP13.38□□□□□ -0.27
CNN3-207ENST00000545882 F5H5K5 113 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 DHRS3O75911 302 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 CD63P08962 238 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 MSR1P21757 451 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 NPBWR1P48145 328 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 HIST1H3AP68431 136 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 C10orf128Q5T292 105 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 HIST2H3PS2Q5TEC6 136 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 GUSBP11Q6P575 273 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 IL34Q6ZMJ4 242 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 FOXL2NBQ6ZUU3 175 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 HIST2H3AQ71DI3 136 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 SMIM8Q96KF7 97 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 UQCC1Q9NVA1 299 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 FAM96BQ9Y3D0 163 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 U3KQA8 63 aa13.38□□□□□ -0.27
CNN3-207ENST00000545882 CACNA1EQ15878 2313 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 IGHV5-10-1A0A0J9YXX1 117 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 CELA2AP08217 269 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 HKR1P10072 659 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 FCGR2AP12318 317 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 ZNF708P17019 499 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 ZNF133P52736 654 aaPredicted RBP13.37□□□□□ -0.27
CNN3-207ENST00000545882 CCL7P80098 99 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 RBM39Q14498 530 aaKnown RBP13.37□□□□□ -0.27
CNN3-207ENST00000545882 RPL7L1Q6DKI1 246 aaKnown RBP13.37□□□□□ -0.27
CNN3-207ENST00000545882 H3F3CQ6NXT2 135 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 HAGHLQ6PII5 290 aaPredicted RBP13.37□□□□□ -0.27
CNN3-207ENST00000545882 PIGTQ969N2 578 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 ZNF385AQ96PM9 386 aaKnown RBP13.37□□□□□ -0.27
CNN3-207ENST00000545882 DEFB126Q9BYW3 111 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 CHST5Q9GZS9 411 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 GSKIPQ9P0R6 139 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 RARRES3Q9UL19 164 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 DHRS7CA6NNS2 312 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 CA11O75493 328 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 PNLIPP16233 465 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 RCC1P18754 421 aaPredicted RBP13.37□□□□□ -0.27
CNN3-207ENST00000545882 OTX1P32242 354 aaPredicted RBP13.37□□□□□ -0.27
CNN3-207ENST00000545882 EIF1P41567 113 aaKnown RBP13.37□□□□□ -0.27
CNN3-207ENST00000545882 CXCL12P48061 93 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 CSNK1A1P48729 337 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 SURF2Q15527 256 aaPredicted RBP13.37□□□□□ -0.27
CNN3-207ENST00000545882 CHRFAM7AQ494W8 412 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 C6orf201Q7Z4U5 140 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 HAS2Q92819 552 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 HDHD3Q9BSH5 251 aaPredicted RBP13.37□□□□□ -0.27
CNN3-207ENST00000545882 SEC11CQ9BY50 192 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 NELFAQ9H3P2 528 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 SAV1Q9H4B6 383 aaPredicted RBP13.37□□□□□ -0.27
CNN3-207ENST00000545882 TREM1Q9NP99 234 aa13.37□□□□□ -0.27
CNN3-207ENST00000545882 IGHV3-15A0A0B4J1V0 119 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms