RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CPT2P23786 658 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 VHLP40337 213 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 GNG3P63215 75 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 CCDC58Q4VC31 144 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 CEP78Q5JTW2 689 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 XAF1Q6GPH4 301 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 MUC20Q8N307 709 aaPredicted RBP16.02■□□□□ 0.16
DDX55-211ENST00000544429 SPICQ8N5J4 248 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 BPIFB6Q8NFQ5 453 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 OR10AC1Q8NH08 325 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 RAB39BQ96DA2 213 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 RNF170Q96K19 258 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 OR51I2Q9H344 312 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 PATZ1Q9HBE1 687 aaKnown RBP16.02■□□□□ 0.16
DDX55-211ENST00000544429 TMEM160Q9NX00 188 aa16.02■□□□□ 0.16
DDX55-211ENST00000544429 ARHGAP32A7KAX9 2087 aa16.02■□□□□ 0.15
DDX55-211ENST00000544429 PPIAL4EA0A075B759 164 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 TMEM212A6NML5 194 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 PPIAL4DF5H284 164 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.01■□□□□ 0.15
DDX55-211ENST00000544429 LALBAP00709 142 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 PPIAL4FP0DN26 164 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 IRF2P14316 349 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 C21orf33P30042 268 aaPredicted RBP16.01■□□□□ 0.15
DDX55-211ENST00000544429 GTF2A1P52655 376 aaPredicted RBP16.01■□□□□ 0.15
DDX55-211ENST00000544429 GBX2P52951 348 aaPredicted RBP16.01■□□□□ 0.15
DDX55-211ENST00000544429 RNLSQ5VYX0 342 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 TMPRSS11AQ6ZMR5 421 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 AHSA2Q719I0 299 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 KLHL36Q8N4N3 616 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 SCCPDHQ8NBX0 429 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 OR51A4Q8NGJ6 313 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 OR10Z1Q8NGY1 313 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 TMEM246Q9BRR3 403 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 CHST5Q9GZS9 411 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 PAK1IP1Q9NWT1 392 aaPredicted RBP16.01■□□□□ 0.15
DDX55-211ENST00000544429 RAB26Q9ULW5 256 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 PPIAL4AQ9Y536 164 aa16.01■□□□□ 0.15
DDX55-211ENST00000544429 PQLC2LA1A4F0 135 aa16■□□□□ 0.15
DDX55-211ENST00000544429 ISPDA4D126 451 aa16■□□□□ 0.15
DDX55-211ENST00000544429 ANKRD61A6NGH8 418 aa16■□□□□ 0.15
DDX55-211ENST00000544429 A6NIN4 97 aa16■□□□□ 0.15
DDX55-211ENST00000544429 A6NLC8 198 aa16■□□□□ 0.15
DDX55-211ENST00000544429 CEACAM18A8MTB9 384 aa16■□□□□ 0.15
DDX55-211ENST00000544429 A8MV72 311 aaPredicted RBP16■□□□□ 0.15
DDX55-211ENST00000544429 SRRM5B3KS81 715 aa16■□□□□ 0.15
DDX55-211ENST00000544429 ZNF732B4DXR9 585 aa16■□□□□ 0.15
DDX55-211ENST00000544429 CDIPTO14735 213 aa16■□□□□ 0.15
DDX55-211ENST00000544429 OGG1O15527 345 aa16■□□□□ 0.15
DDX55-211ENST00000544429 ZNF205O95201 554 aa16■□□□□ 0.15
DDX55-211ENST00000544429 MSMBP08118 114 aa16■□□□□ 0.15
DDX55-211ENST00000544429 RPSAP08865 295 aaKnown RBP16■□□□□ 0.15
DDX55-211ENST00000544429 CCDC159P0C7I6 412 aa16■□□□□ 0.15
DDX55-211ENST00000544429 EGR1P18146 543 aa16■□□□□ 0.15
DDX55-211ENST00000544429 GPM6AP51674 278 aa16■□□□□ 0.15
DDX55-211ENST00000544429 DVL1P1P54792 670 aaPredicted RBP16■□□□□ 0.15
DDX55-211ENST00000544429 SLC35A2P78381 396 aa16■□□□□ 0.15
DDX55-211ENST00000544429 CDK5R1Q15078 307 aa16■□□□□ 0.15
DDX55-211ENST00000544429 UBE2V2Q15819 145 aa16■□□□□ 0.15
DDX55-211ENST00000544429 DMRTC1Q5HYR2 192 aa16■□□□□ 0.15
DDX55-211ENST00000544429 TEX36Q5VZQ5 186 aa16■□□□□ 0.15
DDX55-211ENST00000544429 PLCXD3Q63HM9 321 aa16■□□□□ 0.15
DDX55-211ENST00000544429 FAM166AQ6J272 317 aa16■□□□□ 0.15
DDX55-211ENST00000544429 MOB3CQ70IA8 216 aa16■□□□□ 0.15
DDX55-211ENST00000544429 RPL3LQ92901 407 aaKnown RBP16■□□□□ 0.15
DDX55-211ENST00000544429 ADAT3Q96EY9 351 aaPredicted RBP16■□□□□ 0.15
DDX55-211ENST00000544429 HIST1H2AAQ96QV6 131 aa16■□□□□ 0.15
DDX55-211ENST00000544429 METTL17Q9H7H0 456 aaPredicted RBP16■□□□□ 0.15
DDX55-211ENST00000544429 GPR173Q9NS66 373 aa16■□□□□ 0.15
DDX55-211ENST00000544429 BABAM2Q9NXR7 383 aa16■□□□□ 0.15
DDX55-211ENST00000544429 HHLA2Q9UM44 414 aa16■□□□□ 0.15
DDX55-211ENST00000544429 POLR3KQ9Y2Y1 108 aaPredicted RBP16■□□□□ 0.15
DDX55-211ENST00000544429 SIRT4Q9Y6E7 314 aaPredicted RBP16■□□□□ 0.15
DDX55-211ENST00000544429 WNK2Q9Y3S1 2297 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 A8MXK9 166 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 INAFM1C9JVW0 142 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 H3BSH0 61 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 LGALS8O00214 317 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 TGFAP01135 160 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 CDK1P06493 297 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 WNT2P09544 360 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 DOC2BQ14184 412 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 RPL22L1Q6P5R6 122 aaKnown RBP15.99■□□□□ 0.15
DDX55-211ENST00000544429 UTS2BQ765I0 119 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 PP6455Q8WZ26 134 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 RGP1Q92546 391 aaPredicted RBP15.99■□□□□ 0.15
DDX55-211ENST00000544429 TECTBQ96PL2 329 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 PDCD1LG2Q9BQ51 273 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 DUSP21Q9H596 190 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 PLEKHA1Q9HB21 404 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 YAE1D1Q9NRH1 226 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 PCDHGB5Q9Y5G0 923 aa15.99■□□□□ 0.15
DDX55-211ENST00000544429 NAV3Q8IVL0 2385 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 OOEPA6NGQ2 149 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 MED21Q13503 144 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 DMKNQ6E0U4 476 aaPredicted RBP15.98■□□□□ 0.15
DDX55-211ENST00000544429 DCDC5Q6ZRR9 648 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 ZNF676Q8N7Q3 588 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 NANOGP1Q8N7R0 232 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 C19orf18Q8NEA5 215 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms