RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ELF3P78545 371 aaPredicted RBP14.08□□□□□ -0.16
CD9-209ENST00000540891 ADARB1P78563 741 aaKnown RBP14.08□□□□□ -0.16
CD9-209ENST00000540891 SMN1Q16637 294 aaKnown RBP14.08□□□□□ -0.16
CD9-209ENST00000540891 CEACAM21Q3KPI0 293 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 MOB3CQ70IA8 216 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 DOK3Q7L591 496 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 FAM220AQ7Z4H9 259 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 SCCPDHQ8NBX0 429 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 OR8B3Q8NGG8 313 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 DACT3Q96B18 629 aaPredicted RBP14.08□□□□□ -0.16
CD9-209ENST00000540891 SEH1LQ96EE3 360 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 OR8B2Q96RD0 313 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 OR51I2Q9H344 312 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 NKX1-2Q9UD57 310 aaPredicted RBP14.08□□□□□ -0.16
CD9-209ENST00000540891 PCDHGB1Q9Y5G3 927 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 INSIG2Q9Y5U4 225 aa14.08□□□□□ -0.16
CD9-209ENST00000540891 TRAV38-1A0A0B4J264 116 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 A6NIN4 97 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 DHRS7CA6NNS2 312 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 SRRM5B3KS81 715 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 ZNF732B4DXR9 585 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 H3BSH0 61 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 NRASP01111 189 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 IFNA2P01563 188 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 GYPAP02724 150 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 PITPNBP48739 271 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 NANOS3P60323 173 aaKnown RBP14.07□□□□□ -0.16
CD9-209ENST00000540891 GNB2P62879 340 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 WDR25Q64LD2 544 aaPredicted RBP14.07□□□□□ -0.16
CD9-209ENST00000540891 KCTD8Q6ZWB6 473 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 LHFPL3Q86UP9 236 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 OR5A2Q8NGI9 324 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 OR52I1Q8NGK6 324 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 OR2G2Q8NGZ5 317 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 CNIH3Q8TBE1 160 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 PELI1Q96FA3 418 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 C4orf36Q96KX1 117 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 HIST1H2AAQ96QV6 131 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 C7orf69Q9H7B7 122 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 GPR173Q9NS66 373 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 FRRS1LQ9P0K9 344 aa14.07□□□□□ -0.16
CD9-209ENST00000540891 RPL36Q9Y3U8 105 aaKnown RBP14.07□□□□□ -0.16
CD9-209ENST00000540891 ERICH4A6NGS2 130 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 OR5B21A6NL26 309 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 RHBDL1O75783 438 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 ADRA2CP18825 462 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 AMY2BP19961 511 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 GNG3P63215 75 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 RAB40BQ12829 278 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 GALEQ14376 348 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 KCNJ8Q15842 424 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 CLVS2Q5SYC1 327 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 TTC23Q5W5X9 447 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 PLCXD3Q63HM9 321 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 FDX2Q6P4F2 183 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 NLRC3Q7RTR2 1065 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 KCTD20Q7Z5Y7 419 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 RDH10Q8IZV5 341 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 OR10Z1Q8NGY1 313 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 CYGBQ8WWM9 190 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 ALG8Q9BVK2 526 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 WDR13Q9H1Z4 485 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 ISG20L2Q9H9L3 353 aaKnown RBP14.06□□□□□ -0.16
CD9-209ENST00000540891 SMURF1Q9HCE7 757 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 TRIM36Q9NQ86 728 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 CLN8Q9UBY8 286 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 OR5V1Q9UGF6 321 aa14.06□□□□□ -0.16
CD9-209ENST00000540891 A0A1B0GVI7 797 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 A0A1B0GW55 424 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 J3QLW9 94 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 AKR7A2O43488 359 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 ADAM20O43506 726 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 SYT7O43581 403 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 NDUFA2O43678 99 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 FADS2O95864 444 aaKnown RBP14.05□□□□□ -0.16
CD9-209ENST00000540891 FSHBP01225 129 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 DUX4L2P0CJ85 424 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 DUX4L3P0CJ86 424 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 DUX4L4P0CJ87 422 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 DUX4L5P0CJ88 424 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 DUX4L6P0CJ89 424 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 DUX4L7P0CJ90 424 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 MUC1P15941 1255 aaPredicted RBP14.05□□□□□ -0.16
CD9-209ENST00000540891 ZNF19P17023 458 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 ACTA2P62736 377 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 ACTG2P63267 376 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 DUX4L9Q6RFH8 374 aaPredicted RBP14.05□□□□□ -0.16
CD9-209ENST00000540891 C1QL2Q7Z5L3 287 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 DHRSXQ8N5I4 330 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 MDFIQ99750 246 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 ADI1Q9BV57 179 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 DCLRE1BQ9H816 532 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 ERVK13-1Q9NX77 482 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 DUX4Q9UBX2 424 aa14.05□□□□□ -0.16
CD9-209ENST00000540891 IGHV2-70DA0A0C4DH43 119 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 LOC107986453A0A1B0GWG9 222 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 PQLC2LA1A4F0 135 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 C22orf46C9J442 243 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 UBCP0CG48 685 aaKnown RBP14.04□□□□□ -0.16
CD9-209ENST00000540891 GMFBP60983 142 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms