RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 OR4A4PQ8NGN8 299 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 PIGCQ92535 297 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 NAA11Q9BSU3 229 aaPredicted RBP11.49□□□□□ -0.57
MSH6-210ENST00000540021 NKX2-4Q9H2Z4 354 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 OBP2AQ9NY56 170 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 RCL1Q9Y2P8 373 aaKnown RBP11.49□□□□□ -0.57
MSH6-210ENST00000540021 PHF3Q92576 2039 aaKnown RBP11.49□□□□□ -0.57
MSH6-210ENST00000540021 SPTY2D1-AS1A0A0U1RR47 76 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 ZFP92A6NM28 416 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 CDRT15L2A8MXV6 281 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 NPIPB9F8W1W9 429 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 H0YIZ8 118 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 H3BP45 60 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 ST8SIA3O43173 380 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 CNOT4O95628 575 aaKnown RBP11.49□□□□□ -0.57
MSH6-210ENST00000540021 MFAP5Q13361 173 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 RNF212Q495C1 297 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 KIAA0895LQ68EN5 471 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 SLC22A25Q6T423 547 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 C17orf78Q8N4C9 275 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 OR8B12Q8NGG6 310 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 FAAP24Q9BTP7 215 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 MMACHCQ9Y4U1 282 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 KIAA1671Q9BY89 1806 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 ALG1L2C9J202 215 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 ONECUT2O95948 504 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 ZNF735P0CB33 412 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 DRD1P21728 446 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 GSK3AP49840 483 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 PLXDC1Q8IUK5 500 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 OR1J1Q8NGS3 322 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 SAT2Q96F10 170 aaPredicted RBP11.49□□□□□ -0.57
MSH6-210ENST00000540021 TOLLIPQ9H0E2 274 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 C19orf12Q9NSK7 152 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 GFOD1Q9NXC2 390 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 PCOLCE2Q9UKZ9 415 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 A0A1B0GTI1 187 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 PPP1R2P9O14990 202 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 CD74P04233 296 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 GABRG2P18507 467 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 MRPS34P82930 218 aaKnown RBP11.48□□□□□ -0.57
MSH6-210ENST00000540021 PHF19Q5T6S3 580 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 DHRS7BQ6IAN0 325 aaPredicted RBP11.48□□□□□ -0.57
MSH6-210ENST00000540021 FAHD2BQ6P2I3 314 aaPredicted RBP11.48□□□□□ -0.57
MSH6-210ENST00000540021 DOK3Q7L591 496 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 SSX9Q7RTT3 188 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 SLC38A9Q8NBW4 561 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 OR10D4PQ8NGN7 298 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 SCGB1C1Q8TD33 95 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 GPBAR1Q8TDU6 330 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 AQP3Q92482 292 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 FAHD2AQ96GK7 314 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 UNKLQ9H9P5 680 aaKnown RBP11.48□□□□□ -0.57
MSH6-210ENST00000540021 DKKL1Q9UK85 242 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 IFNA5P01569 189 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 ZNF84P51523 738 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 S100A12P80511 92 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 FZD2Q14332 565 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 ARL6IP1Q15041 203 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 HIST2H3PS2Q5TEC6 136 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 C9orf135Q5VTT2 229 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 Q6ZS52 159 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 C15orf54Q8N8G6 183 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 LRRC75AQ8NAA5 344 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 METTL9Q9H1A3 318 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 LPAR5Q9H1C0 372 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 AK3Q9UIJ7 227 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 PLXNA2O75051 1894 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 IGKV1D-43A0A0B4J1Z2 117 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 CYB5BO43169 146 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 SLC34A2O95436 690 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 RAB5AP20339 215 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 EIF2S3P41091 472 aaKnown RBP11.48□□□□□ -0.57
MSH6-210ENST00000540021 RPL23AP62750 156 aaKnown RBP11.48□□□□□ -0.57
MSH6-210ENST00000540021 DLX2Q07687 328 aaPredicted RBP11.48□□□□□ -0.57
MSH6-210ENST00000540021 MYBPHQ13203 477 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 HOGA1Q86XE5 327 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 PLPP5Q8NEB5 264 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 DYRK2Q92630 601 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 NIPSNAP3BQ9BS92 247 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 ULBP2Q9BZM5 246 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 FAM117AQ9C073 453 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 PRO1933Q9H354 126 aa11.48□□□□□ -0.57
MSH6-210ENST00000540021 FRMPD3Q5JV73 1810 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 H3BMH7 237 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 SSSCA1O60232 199 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 OR5AC1P0C628 307 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 CD38P28907 300 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 SULT1A1P50225 295 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 RAB11AP62491 216 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 TMEM268Q5VZI3 342 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 C9orf40Q8IXQ3 194 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 OR13G1Q8NGZ3 307 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 OR2AE1Q8NHA4 323 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 FLVCR1-AS1Q8TAF5 88 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 E5RGE8 158 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 DDAH2O95865 285 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 ACAA1P09110 424 aaPredicted RBP11.47□□□□□ -0.57
MSH6-210ENST00000540021 H2AFB1P0C5Y9 115 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 ROM1Q03395 351 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms