RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 C10orf53Q8N6V4 93 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 GVQW1Q8N7I0 195 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 PLPP7Q8NBV4 271 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 CLDND2Q8NHS1 167 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 EMG1Q92979 244 aaKnown RBP11.02□□□□□ -0.65
USP3-203ENST00000538686 RPUSD4Q96CM3 377 aaKnown RBP11.02□□□□□ -0.65
USP3-203ENST00000538686 SPACA7Q96KW9 195 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 OR8B4Q96RC9 309 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 MAP1LC3BQ9GZQ8 125 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 SH3BGRL3Q9H299 93 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 SDF2L1Q9HCN8 221 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 AK3Q9UIJ7 227 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 ANAPC10Q9UM13 185 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 DHDHQ9UQ10 334 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 LAMP3Q9UQV4 416 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 ST3GAL6Q9Y274 331 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 ENTPD2Q9Y5L3 495 aa11.02□□□□□ -0.65
USP3-203ENST00000538686 A0A1B0GV50 99 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 ANKUB1A6NFN9 424 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 K7ERU9 68 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 TSPAN6O43657 245 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 KLF8O95600 359 aaPredicted RBP11.01□□□□□ -0.65
USP3-203ENST00000538686 ARR3P36575 388 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 PRLHRP49683 370 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 EFNA3P52797 238 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 FHL1Q13642 323 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 OCIAD2Q56VL3 154 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 SP5Q6BEB4 398 aaPredicted RBP11.01□□□□□ -0.65
USP3-203ENST00000538686 TMEM184AQ6ZMB5 413 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 CDC20BQ86Y33 519 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 C12orf76Q8N812 135 aaPredicted RBP11.01□□□□□ -0.65
USP3-203ENST00000538686 OR51A4Q8NGJ6 313 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 OR10AC1Q8NH08 325 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 ZNF689Q96CS4 500 aaPredicted RBP11.01□□□□□ -0.65
USP3-203ENST00000538686 SDSLQ96GA7 329 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 ZNF700Q9H0M5 742 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 WFDC1Q9HC57 220 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 GPR84Q9NQS5 396 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 TMEM106BQ9NUM4 274 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 SLC45A2Q9UMX9 530 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 FUT9Q9Y231 359 aa11.01□□□□□ -0.65
USP3-203ENST00000538686 LSM5Q9Y4Y9 91 aaKnown RBP11.01□□□□□ -0.65
USP3-203ENST00000538686 RBM7Q9Y580 266 aaKnown RBP11.01□□□□□ -0.65
USP3-203ENST00000538686 A0A087WV48 116 aa11□□□□□ -0.65
USP3-203ENST00000538686 TMEM202A6NGA9 273 aa11□□□□□ -0.65
USP3-203ENST00000538686 OR2AG2A6NM03 316 aa11□□□□□ -0.65
USP3-203ENST00000538686 TYMSP04818 313 aa11□□□□□ -0.65
USP3-203ENST00000538686 CTXN2P0C2S0 81 aa11□□□□□ -0.65
USP3-203ENST00000538686 OR4Q2P0C623 313 aa11□□□□□ -0.65
USP3-203ENST00000538686 SMIM10L2AP0DMW4 78 aa11□□□□□ -0.65
USP3-203ENST00000538686 SMIM10L2BP0DMW5 78 aa11□□□□□ -0.65
USP3-203ENST00000538686 CEACAM1P13688 526 aa11□□□□□ -0.65
USP3-203ENST00000538686 ZNF43P17038 809 aa11□□□□□ -0.65
USP3-203ENST00000538686 GRPRP30550 384 aa11□□□□□ -0.65
USP3-203ENST00000538686 CCL20P78556 96 aa11□□□□□ -0.65
USP3-203ENST00000538686 IL13RA2Q14627 380 aa11□□□□□ -0.65
USP3-203ENST00000538686 ZNF880Q6PDB4 577 aa11□□□□□ -0.65
USP3-203ENST00000538686 PLXDC2Q6UX71 529 aa11□□□□□ -0.65
USP3-203ENST00000538686 D2HGDHQ8N465 521 aa11□□□□□ -0.65
USP3-203ENST00000538686 CHST4Q8NCG5 386 aa11□□□□□ -0.65
USP3-203ENST00000538686 OR2G3Q8NGZ4 309 aa11□□□□□ -0.65
USP3-203ENST00000538686 HHIPL1Q96JK4 782 aa11□□□□□ -0.65
USP3-203ENST00000538686 NMNAT3Q96T66 252 aa11□□□□□ -0.65
USP3-203ENST00000538686 RTBDNQ9BSG5 229 aaPredicted RBP11□□□□□ -0.65
USP3-203ENST00000538686 TMEM9BQ9NQ34 198 aa11□□□□□ -0.65
USP3-203ENST00000538686 LANCL2Q9NS86 450 aa11□□□□□ -0.65
USP3-203ENST00000538686 TM7SF3Q9NS93 570 aa11□□□□□ -0.65
USP3-203ENST00000538686 UQCR10Q9UDW1 63 aa11□□□□□ -0.65
USP3-203ENST00000538686 LOC102723971A0A1B0GUV8 181 aa11□□□□□ -0.65
USP3-203ENST00000538686 YPEL1O60688 119 aa11□□□□□ -0.65
USP3-203ENST00000538686 MTX2O75431 263 aa11□□□□□ -0.65
USP3-203ENST00000538686 NID1P14543 1247 aa11□□□□□ -0.65
USP3-203ENST00000538686 IGFBP3P17936 291 aaPredicted RBP11□□□□□ -0.65
USP3-203ENST00000538686 CCR5P51681 352 aa11□□□□□ -0.65
USP3-203ENST00000538686 PRSS8Q16651 343 aa11□□□□□ -0.65
USP3-203ENST00000538686 FBXO42Q6P3S6 717 aa11□□□□□ -0.65
USP3-203ENST00000538686 ZNF550Q7Z398 422 aa11□□□□□ -0.65
USP3-203ENST00000538686 CSNK1A1LQ8N752 337 aa11□□□□□ -0.65
USP3-203ENST00000538686 TOMM40LQ969M1 308 aa11□□□□□ -0.65
USP3-203ENST00000538686 SLC35A4Q96G79 324 aa11□□□□□ -0.65
USP3-203ENST00000538686 YPEL2Q96QA6 119 aa11□□□□□ -0.65
USP3-203ENST00000538686 P2RX4Q99571 388 aa11□□□□□ -0.65
USP3-203ENST00000538686 LPAR4Q99677 370 aa11□□□□□ -0.65
USP3-203ENST00000538686 GABRG3Q99928 467 aa11□□□□□ -0.65
USP3-203ENST00000538686 ZNF430Q9H8G1 570 aaPredicted RBP11□□□□□ -0.65
USP3-203ENST00000538686 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11□□□□□ -0.65
USP3-203ENST00000538686 ZNF701Q9NV72 531 aaPredicted RBP11□□□□□ -0.65
USP3-203ENST00000538686 ZNF219Q9P2Y4 722 aaPredicted RBP11□□□□□ -0.65
USP3-203ENST00000538686 MRPS2Q9Y399 296 aaKnown RBP11□□□□□ -0.65
USP3-203ENST00000538686 IGHV2OR16-5A0A0B4J2B6 119 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 SSR2P43308 183 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 FGF8P55075 233 aaPredicted RBP10.99□□□□□ -0.65
USP3-203ENST00000538686 FAM98CQ17RN3 349 aaKnown RBP10.99□□□□□ -0.65
USP3-203ENST00000538686 TCEAL5Q5H9L2 206 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 FAM90A2PQ658T7 463 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 LHFPL1Q86WI0 220 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 ZNF619Q8N2I2 560 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 OR4D6Q8NGJ1 314 aa10.99□□□□□ -0.65
USP3-203ENST00000538686 GRHL3Q8TE85 626 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms