RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 HIST1H2BOP23527 126 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CHATP28329 748 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 IL12BP29460 328 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 GCH1P30793 250 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR10J1P30954 320 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HIST1H2BBP33778 126 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ARL3P36405 182 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 P2RY2P41231 377 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 RPS10P46783 165 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 LGALS7P47929 136 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CYB561P49447 251 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SULT1A1P50225 295 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 RAB28P51157 221 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 MMP15P51511 669 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CCR8P51685 355 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 EFNA5P52803 228 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CRYBA4P53673 196 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 GEMP55040 296 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 BIDP55957 195 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 BACE1P56817 501 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR4D2P58180 307 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HIST1H2BDP58876 126 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ARF3P61204 181 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 SNRPFP62306 86 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 RAB11AP62491 216 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HIST1H2BCP62807 126 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ARF1P84077 181 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 RHOGP84095 191 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CDK5Q00535 292 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 PAX5Q02548 391 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ARHGAP1Q07960 439 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 IL10RBQ08334 325 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SIGLEC14Q08ET2 396 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 RIGQ13278 110 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 RCAN2Q14206 197 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 TMEM132DQ14C87 1099 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 EBPQ15125 230 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 PTGES3Q15185 160 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZBTB6Q15916 424 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SNRNP35Q16560 246 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 UGCGQ16739 394 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HIST2H2BEQ16778 126 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZSWIM7Q19AV6 140 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ODF4Q2M2E3 257 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SLC36A2Q495M3 483 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 XKR7Q5GH72 579 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 TCTEX1D4Q5JR98 221 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 COA6Q5JTJ3 125 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 SPANXN3Q5MJ09 141 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 CST9Q5W186 159 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 TMEM225Q6GV28 225 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR2T5Q6IEZ7 315 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 REEP3Q6NUK4 255 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 NCEH1Q6PIU2 408 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CD200R1LQ6Q8B3 271 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SMARCD3Q6STE5 483 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ENPP6Q6UWR7 440 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZNF705AQ6ZN79 300 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 TMEM91Q6ZNR0 172 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ACOT7LQ6ZUV0 252 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 DET1Q7L5Y6 550 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SLC35E3Q7Z769 313 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 TMEM179BQ7Z7N9 219 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 S100A7AQ86SG5 101 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 TBC1D26Q86UD7 250 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZNF546Q86UE3 836 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 RBM45Q8IUH3 476 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 TMEM183AQ8IXX5 376 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZNF100Q8IYN0 542 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HS3ST5Q8IZT8 346 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 KDM8Q8N371 416 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 TMEM156Q8N614 296 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 EID2Q8N6I1 236 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 FAM86B1Q8N7N1 296 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SLC30A7Q8NEW0 376 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR10H4Q8NGA5 316 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR4K2Q8NGD2 314 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR5AP2Q8NGF4 316 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR51S1Q8NGJ8 323 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR9I1Q8NGQ6 314 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR1L6Q8NGR2 347 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR1J2Q8NGS2 313 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR13C4Q8NGS5 318 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR2A12Q8NGT7 310 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR2T29Q8NH02 315 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR51F2Q8NH61 342 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CASTOR1Q8WTX7 329 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 FCAMRQ8WWV6 532 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 RLN3Q8WXF3 142 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CACNG8Q8WXS5 425 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ARNTL2Q8WYA1 636 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HIST1H2BHQ93079 126 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 MCHR2Q969V1 340 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 TMEM186Q96B77 213 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 RAB39BQ96DA2 213 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 C16orf58Q96GQ5 468 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 PYURFQ96I23 114 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 AKR1E2Q96JD6 320 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 PRRC1Q96M27 445 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms