RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CA6P23280 308 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 HSD11B1P28845 292 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 POLR2IP36954 125 aaKnown RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 SRP9P49458 86 aaKnown RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 ZNF121P58317 390 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 BTG1P62324 171 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 RIPPLY1Q0D2K3 151 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 ZMYND11Q15326 602 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 LRRC36Q1X8D7 754 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 TMEM155Q4W5P6 130 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 AADACL4Q5VUY2 407 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 C12orf73Q69YU5 71 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 ASPHD2Q6ICH7 369 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 SLC16A9Q7RTY1 509 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 MRPL21Q7Z2W9 205 aaKnown RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 BCDIN3DQ7Z5W3 292 aaKnown RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 MOGAT3Q86VF5 341 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 CELF2-AS1Q8N7Q2 184 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 Q8TCH9 128 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 THEM6Q8WUY1 208 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 SPRYD4Q8WW59 207 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 C12orf43Q96C57 262 aaKnown RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 RAB39BQ96DA2 213 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 CENPNQ96H22 339 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 CNBD2Q96M20 576 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 GAL3ST1Q99999 423 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 OSBPL10Q9BXB5 764 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 TEX12Q9BXU0 123 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 SLC22A4Q9H015 551 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 ZMAT3Q9HA38 289 aaKnown RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 PATZ1Q9HBE1 687 aaKnown RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 DNAJC27Q9NZQ0 273 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 MRPL15Q9P015 296 aaKnown RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 OAZ3Q9UMX2 235 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 PPIAL4AQ9Y536 164 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 N6AMT1Q9Y5N5 214 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 hCG_38984A0A1B0GV85 526 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 GGT3PA6NGU5 568 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 PRR32B1ATL7 298 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 F5H0A9 414 aaPredicted RBP7.05□□□□□ -1.28
SSBP3-212ENST00000528930 H0YAE9 185 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 C3orf84H3BNL1 204 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 IFNL4K9M1U5 179 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 M0R129 80 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 RGS13O14921 159 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 TBX1O43435 398 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 GMDSO60547 372 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 NOL3O60936 208 aaKnown RBP7.05□□□□□ -1.28
SSBP3-212ENST00000528930 ZNF205O95201 554 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 FSTL3O95633 263 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 APOC1P02654 83 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 ANXA2P07355 339 aaKnown RBP7.05□□□□□ -1.28
SSBP3-212ENST00000528930 H2BFMP0C1H6 154 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 PRTN3P24158 256 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 DDOSTP39656 456 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 SEC61A1P61619 476 aaKnown RBP7.05□□□□□ -1.28
SSBP3-212ENST00000528930 RPS7P62081 194 aaKnown RBP7.05□□□□□ -1.28
SSBP3-212ENST00000528930 ZNF846Q147U1 533 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 OR8G1Q15617 311 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 MPPED2Q15777 294 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 FAM201AQ5SY85 155 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 PRAMEF6Q5VXH4 476 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 LRRN1Q6UXK5 716 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 FAM57BQ71RH2 274 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 MEPCEQ7L2J0 689 aaKnown RBP7.05□□□□□ -1.28
SSBP3-212ENST00000528930 TCEANCQ8N8B7 351 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 OR56B2PQ8NGI1 322 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 OR52H1Q8NGJ2 320 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 TMEM163Q8TC26 289 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 RAB2BQ8WUD1 216 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 DVL3Q92997 716 aaPredicted RBP7.05□□□□□ -1.28
SSBP3-212ENST00000528930 ERGIC1Q969X5 290 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 REEP6Q96HR9 211 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 CIB1Q99828 191 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 GABARAPL3Q9BY60 117 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 WDR12Q9GZL7 423 aaKnown RBP7.05□□□□□ -1.28
SSBP3-212ENST00000528930 OPA3Q9H6K4 179 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 SP140LQ9H930 580 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 LAMP5Q9UJQ1 280 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 COPS3Q9UNS2 423 aa7.05□□□□□ -1.28
SSBP3-212ENST00000528930 POLR3KQ9Y2Y1 108 aaPredicted RBP7.05□□□□□ -1.28
SSBP3-212ENST00000528930 PPIAL4EA0A075B759 164 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 SAC3D1A6NKF1 404 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 CEACAM18A8MTB9 384 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 E9PQ18 207 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 PPIAL4DF5H284 164 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 FAM20BO75063 409 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 CLPXO76031 633 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 PNPP00491 289 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 MRPL3P09001 348 aaKnown RBP7.04□□□□□ -1.28
SSBP3-212ENST00000528930 WNT2P09544 360 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 PPIAL4FP0DN26 164 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 MDH2P40926 338 aaKnown RBP7.04□□□□□ -1.28
SSBP3-212ENST00000528930 BMXP51813 675 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 LCN2P80188 198 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 HOXA4Q00056 320 aaPredicted RBP7.04□□□□□ -1.28
SSBP3-212ENST00000528930 TIGD6Q17RP2 521 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 LCN1P1Q5VSP4 162 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 NXNL2Q5VZ03 156 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 FAHD2BQ6P2I3 314 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms