RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 OR6C6A6NF89 314 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 NUPL2O15504 423 aaKnown RBP8.93□□□□□ -0.98
MCF2-209ENST00000520602 TGFBR3Q03167 851 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 TGIF1Q15583 401 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 DCAF10Q5QP82 559 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 TIPARPQ7Z3E1 657 aaKnown RBP8.93□□□□□ -0.98
MCF2-209ENST00000520602 TUSC5Q8IXB3 177 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 SPICQ8N5J4 248 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 NANOS1Q8WY41 292 aaKnown RBP8.93□□□□□ -0.98
MCF2-209ENST00000520602 MRPL13Q9BYD1 178 aaKnown RBP8.93□□□□□ -0.98
MCF2-209ENST00000520602 ASF1BQ9NVP2 202 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 U3KQA8 63 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 hCG_1807616A0A1W2PRN6 198 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 PDGFAP04085 211 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 ATF4P18848 351 aaPredicted RBP8.93□□□□□ -0.98
MCF2-209ENST00000520602 C1orf100Q5SVJ3 147 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 SPATA46Q5T0L3 261 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 DCAF12L2Q5VW00 463 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 DEFB124Q8NES8 71 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 SYT3Q9BQG1 590 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 BCO1Q9HAY6 547 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 MBD2Q9UBB5 411 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 IL17BQ9UHF5 180 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 FLVCR1Q9Y5Y0 555 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 SZT2Q5T011 3432 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 ICE1Q9Y2F5 2266 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 ZNF407Q9C0G0 2248 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 A0A1W2PR80 420 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 SP9P0CG40 484 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 FAM157BP0CG42 384 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 EDN3P14138 238 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 RAB1AP62820 205 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 VAMP2P63027 116 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 ZFP36L1Q07352 338 aaKnown RBP8.92□□□□□ -0.98
MCF2-209ENST00000520602 CLN3Q13286 438 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 FAM74A1Q5RGS3 127 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.92□□□□□ -0.98
MCF2-209ENST00000520602 TMEM178AQ8NBL3 297 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 TMPRSS13Q9BYE2 586 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 ZNF286AQ9HBT8 521 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 A0A0D9SG52 128 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 NPIPB13A6NJU9 1138 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 NPIPB4C9JG80 1138 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 MCRIP1C9JLW8 97 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 GP1BAP07359 652 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 GLRA1P23415 457 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 HOXA6P31267 233 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 PTGDSP41222 190 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 MEOX1P50221 254 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 RRADP55042 308 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 EIF5AP63241 154 aaKnown RBP8.92□□□□□ -0.98
MCF2-209ENST00000520602 MRPS34P82930 218 aaKnown RBP8.92□□□□□ -0.98
MCF2-209ENST00000520602 TRIP6Q15654 476 aaKnown RBP8.92□□□□□ -0.98
MCF2-209ENST00000520602 IAH1Q2TAA2 248 aaPredicted RBP8.92□□□□□ -0.98
MCF2-209ENST00000520602 TSPO2Q5TGU0 170 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 ZNF385CQ66K41 422 aaPredicted RBP8.92□□□□□ -0.98
MCF2-209ENST00000520602 EIF5AL1Q6IS14 154 aaKnown RBP8.92□□□□□ -0.98
MCF2-209ENST00000520602 RFPL4BQ6ZWI9 263 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 SLC51BQ86UW2 128 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 FAM219AQ8IW50 185 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 GCNT2Q8N0V5 402 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 ADPRHL1Q8NDY3 354 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 TMEM185AQ8NFB2 350 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 SECTM1Q8WVN6 248 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 SF3B5Q9BWJ5 86 aaKnown RBP8.92□□□□□ -0.98
MCF2-209ENST00000520602 FOXJ2Q9P0K8 574 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 OPN4Q9UHM6 478 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 OR5H8P0DN80 308 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 CPN1P15169 458 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 HAAOP46952 286 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 IDH3GP51553 393 aaPredicted RBP8.92□□□□□ -0.98
MCF2-209ENST00000520602 CDCP2Q5VXM1 449 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 RTL6Q6ICC9 239 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 OR2W3Q7Z3T1 314 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 OR10S1Q8NGN2 331 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 TMEM38BQ9NVV0 291 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 CSAG2Q9Y5P2 127 aa8.92□□□□□ -0.98
MCF2-209ENST00000520602 AGPAT2O15120 278 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 CYC1P08574 325 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 ZNF728P0DKX0 622 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 ZNF133P52736 654 aaPredicted RBP8.91□□□□□ -0.98
MCF2-209ENST00000520602 PPA1Q15181 289 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 PHYHD1Q5SRE7 291 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 SLC22A25Q6T423 547 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 OR2M7Q8NG81 312 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 ZNF319Q9P2F9 582 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 GHRLQ9UBU3 117 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 KCNS2Q9ULS6 477 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 LOC102723996A0A087X1L8 192 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 A0A1B0GV50 99 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 NTN3O00634 580 aaPredicted RBP8.91□□□□□ -0.98
MCF2-209ENST00000520602 HS3ST1O14792 307 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 FBXO24O75426 580 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 CRYZL1O95825 349 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 CEBPGP53567 150 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 MICBQ29980 383 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 SNAI3Q3KNW1 292 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 FAM27BQ5VT28 67 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 FADS6Q8N9I5 356 aa8.91□□□□□ -0.98
MCF2-209ENST00000520602 OR56B2PQ8NGI1 322 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms