RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 RDH10Q8IZV5 341 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 BLIDQ8IZY5 108 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC34A3Q8N130 599 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 LGI3Q8N145 548 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR6V1Q8N148 313 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 LRRC25Q8N386 305 aaPredicted RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CADM2Q8N3J6 435 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ATPAF2Q8N5M1 289 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 NPWQ8N729 165 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CLDN22Q8N7P3 220 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC35G3Q8N808 338 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF614Q8N883 585 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF491Q8N8L2 437 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GATD1Q8NB37 220 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SUMF1Q8NBK3 374 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM178AQ8NBL3 297 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 UBAC2Q8NBM4 344 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CHST4Q8NCG5 386 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNRF1Q8ND25 227 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 MDS2Q8NDY4 140 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM161BQ8NDZ6 487 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PRSS33Q8NF86 280 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10G3Q8NGC4 313 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR52B6Q8NGF0 335 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR51D1Q8NGF3 324 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR52E2Q8NGJ4 325 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR51S1Q8NGJ8 323 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR51G1Q8NGK1 321 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR5AR1Q8NGP9 310 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR1N2Q8NGR9 330 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2A12Q8NGT7 310 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR11L1Q8NGX0 322 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR6K3Q8NGY3 331 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10J6PQ8NGY7 276 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2T11Q8NH01 316 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2T29Q8NH02 315 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10A6Q8NH74 314 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR1S1Q8NH92 325 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2AE1Q8NHA4 323 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2T6Q8NHC8 308 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CCDC26Q8TAB7 109 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 FLVCR1-AS1Q8TAF5 88 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR51E1Q8TCB6 317 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 NT5CQ8TCD5 201 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PIFOQ8TCI5 191 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 BLOC1S5Q8TDH9 187 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 HAVCR2Q8TDQ0 301 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 NEK7Q8TDX7 302 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ADAMTS16Q8TE57 1224 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 DTD1Q8TEA8 209 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZFP90Q8TF47 636 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SDR42E1Q8WUS8 393 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 EEF1AKMT1Q8WVE0 214 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 KCTD4Q8WVF5 259 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ASB13Q8WXK3 278 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM234Q8WY98 164 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR5P2Q8WZ92 322 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ARPC1AQ92747 370 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 RDH5Q92781 318 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TAF15Q92804 592 aaKnown RBP eCLIP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 FGF11Q92914 225 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 RAB8BQ92930 207 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM54Q969K7 222 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC35B4Q969S0 331 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM230Q96A57 120 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 RERGQ96A58 199 aaPredicted RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 NABP1Q96AH0 204 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TESCQ96BS2 214 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 HAUS1Q96CS2 278 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 DDIT4LQ96D03 193 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZMYND19Q96E35 227 aaPredicted RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SEH1LQ96EE3 360 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZHX1-C8orf76Q96EF9 292 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SMIM12Q96EX1 92 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 DYNLL2Q96FJ2 89 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GALNT14Q96FL9 552 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 IMP4Q96G21 291 aaKnown RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 MRAP2Q96G30 205 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 MRPL48Q96GC5 212 aaKnown RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SMARCD1Q96GM5 515 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF486Q96H40 463 aaPredicted RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ADTRPQ96IZ2 230 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 BTF3L4Q96K17 158 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 C18orf12Q96KH6 178 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CEP170P1Q96L14 293 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PGLYRP4Q96LB8 373 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 UBE2E2Q96LR5 201 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF488Q96MN9 340 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM56Q96MV1 263 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 RDH12Q96NR8 316 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZIM3Q96PE6 472 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2M4Q96R27 311 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2V2Q96R30 315 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF300Q96RE9 604 aaPredicted RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 P2RX4Q99571 388 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PHB2Q99623 299 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CGREF1Q99674 301 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GPR22Q99680 433 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GABRG3Q99928 467 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ATF6BQ99941 703 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms