RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 LACC1Q8IV20 430 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 RGP1Q92546 391 aaPredicted RBP8.02□□□□□ -1.13
VCAN-208ENST00000512590 MOGAT1Q96PD6 335 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 USP32Q8NFA0 1604 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 ZC3H13Q5T200 1668 aaKnown RBP8.02□□□□□ -1.13
VCAN-208ENST00000512590 DHHO43323 396 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 CD22P20273 847 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 DDOSTP39656 456 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 ATP5G2Q06055 141 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 TMEM183BQ1AE95 376 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 TEX261Q6UWH6 196 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 ZNF596Q8TC21 504 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 RASD2Q96D21 266 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 MS4A4AQ96JQ5 239 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 GPA33Q99795 319 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 AK3Q9UIJ7 227 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 KRBA1A5PL33 1030 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 TDGF1P13385 188 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 FABP9Q0Z7S8 132 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 ABI3BPQ7Z7G0 1075 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 KCNRGQ8N5I3 272 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 VGLL2Q8N8G2 317 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 TP53I13Q8NBR0 393 aaPredicted RBP8.02□□□□□ -1.13
VCAN-208ENST00000512590 RNF141Q8WVD5 230 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 FGF22Q9HCT0 170 aa8.02□□□□□ -1.13
VCAN-208ENST00000512590 PPIAL4EA0A075B759 164 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 CLEC18AA5D8T8 446 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 PPIAL4DF5H284 164 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 APELAP0DMC3 54 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 PPIAL4FP0DN26 164 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 FAM189BP81408 668 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 SOWAHCQ53LP3 525 aaPredicted RBP8.01□□□□□ -1.13
VCAN-208ENST00000512590 OR2G6Q5TZ20 316 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 UNQ5815/PRO19632Q6UWF5 114 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 PARP16Q8N5Y8 322 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 CLEC18CQ8NCF0 446 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 RAB37Q96AX2 223 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 TBC1D29Q9UFV1 150 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 PPIAL4AQ9Y536 164 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 NEURL4Q96JN8 1562 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 A0A1B0GTH9 108 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 DHRS7CA6NNS2 312 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 B3GALT4O96024 378 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 CD14P08571 375 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 RRASP10301 218 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 RPL35P42766 123 aaKnown RBP8.01□□□□□ -1.13
VCAN-208ENST00000512590 SORDQ00796 357 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 ZNF415Q09FC8 603 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 MN1Q10571 1320 aaPredicted RBP8.01□□□□□ -1.13
VCAN-208ENST00000512590 RAB40BQ12829 278 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 GLYATL3Q5SZD4 288 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 ZNF770Q6IQ21 691 aaPredicted RBP8.01□□□□□ -1.13
VCAN-208ENST00000512590 APOOLQ6UXV4 268 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 OR4Q3Q8NH05 313 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 RFESDQ8TAC1 157 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 CLDN23Q96B33 292 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 OR51J1Q9H342 316 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 MED20Q9H944 212 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 ZNF586Q9NXT0 402 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 NTMQ9P121 344 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 LGALS13Q9UHV8 139 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 TCRBV4S1A1TA0A5B7 111 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 GPRIN2O60269 458 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 RECKO95980 971 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 IGHV3-13P01766 116 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 IGHV3-7P01780 117 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 CHRM2P08172 466 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 ALDOCP09972 364 aaKnown RBP8.01□□□□□ -1.13
VCAN-208ENST00000512590 ANKRD55Q3KP44 614 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 LCN15Q6UWW0 184 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 OSR2Q8N2R0 312 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 STPG3Q8N7X2 389 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 OR2T35Q8NGX2 323 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 TMEM106AQ96A25 262 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 GPX7Q96SL4 187 aaPredicted RBP8.01□□□□□ -1.13
VCAN-208ENST00000512590 ARHGDIGQ99819 225 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 NAA60Q9H7X0 242 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 RIMBP3Q9UFD9 1639 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 PITX3O75364 302 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 OR2T7P0C7T2 308 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 MTNR1BP49286 362 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 MVDP53602 400 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 SPCS3P61009 180 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 Q499Y3 187 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 SOHLH1Q5JUK2 328 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 CORO6Q6QEF8 472 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 ASCL4Q6XD76 172 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 GLIS1Q8NBF1 620 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 ZNF740Q8NDX6 193 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 ADPRHL1Q8NDY3 354 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 GUCD1Q96NT3 240 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 THAP7Q9BT49 309 aaPredicted RBP8.01□□□□□ -1.13
VCAN-208ENST00000512590 PRR32B1ATL7 298 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 ST8SIA3O43173 380 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 SOX15O60248 233 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 SDHAP31040 664 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 ENDOGQ14249 297 aaKnown RBP8.01□□□□□ -1.13
VCAN-208ENST00000512590 ANKRD33Q7Z3H0 272 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 LRRTM3Q86VH5 581 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 PDPNQ86YL7 162 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms