RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TM2D1Q9BX74 207 aa13.08□□□□□ -0.31
SCLT1-209ENST00000511426 METTL9Q9H1A3 318 aa13.08□□□□□ -0.31
SCLT1-209ENST00000511426 OCEL1Q9H607 264 aa13.08□□□□□ -0.31
SCLT1-209ENST00000511426 RBFOX1Q9NWB1 397 aaKnown RBP13.08□□□□□ -0.31
SCLT1-209ENST00000511426 IGHV2OR16-5A0A0B4J2B6 119 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 TRGV8A0A0C4DH27 118 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 A0A1W2PR80 420 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 PQLC2LA1A4F0 135 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 PRSS44E7EML9 344 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 RAB27BO00194 218 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 CDC14BO60729 498 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 KDM4BO94953 1096 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 CPT2P23786 658 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 NAAAQ02083 359 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 ZNF57Q68EA5 555 aaPredicted RBP13.08□□□□□ -0.32
SCLT1-209ENST00000511426 MYPOPQ86VE0 399 aaPredicted RBP13.08□□□□□ -0.32
SCLT1-209ENST00000511426 FAM89BQ8N5H3 189 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 RELL2Q8NC24 303 aaPredicted RBP13.08□□□□□ -0.32
SCLT1-209ENST00000511426 OR1J1Q8NGS3 322 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 SPACA5Q96QH8 159 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 LPAR5Q9H1C0 372 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 RHOFQ9HBH0 211 aa13.08□□□□□ -0.32
SCLT1-209ENST00000511426 DMXL2Q8TDJ6 3036 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 TRAV18A0A075B6X5 111 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 NAP1L6A6NFF2 107 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 ZNF850A8MQ14 1090 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 LYRM1O43325 122 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 CRYAAP02489 173 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 MELTFP08582 738 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 PRSS3P35030 304 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 ACTBP60709 375 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 RPS27AP62979 156 aaKnown RBP13.07□□□□□ -0.32
SCLT1-209ENST00000511426 ACTG1P63261 375 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 HLXQ14774 488 aaPredicted RBP13.07□□□□□ -0.32
SCLT1-209ENST00000511426 TAB1Q15750 504 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 FBXL19-AS1Q494R0 122 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 MBNL2Q5VZF2 373 aaKnown RBP13.07□□□□□ -0.32
SCLT1-209ENST00000511426 SEZ6L2Q6UXD5 910 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 TMEM200AQ86VY9 491 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 NPRL2Q8WTW4 380 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.07□□□□□ -0.326e-6■■■■□ 22.2
SCLT1-209ENST00000511426 FAIMQ9NVQ4 179 aa13.07□□□□□ -0.32
SCLT1-209ENST00000511426 FAM230AA0A1W2PPH8 454 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 H3BUI4 141 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 H7C417 338 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 PLA2G10O15496 165 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 AKR7A2O43488 359 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 AGFG2O95081 481 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 CSTBP04080 98 aaKnown RBP13.06□□□□□ -0.32
SCLT1-209ENST00000511426 LPLP06858 475 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 GSTP1P09211 210 aaKnown RBP13.06□□□□□ -0.32
SCLT1-209ENST00000511426 TMEM225BP0DP42 221 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 GTF2F2P13984 249 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 KITLGP21583 273 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 GDNFP39905 211 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 ASCL1P50553 236 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 RPS23P62266 143 aaKnown RBP13.06□□□□□ -0.32
SCLT1-209ENST00000511426 GNG3P63215 75 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 DGCR2P98153 550 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 PLA2G7Q13093 441 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 PDZK1IP1Q13113 114 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 ZNF718Q3SXZ3 478 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 GDPD3Q7L5L3 318 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 ZNF573Q86YE8 665 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 DUSP18Q8NEJ0 188 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 Q8NFD4 153 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 OR10R2Q8NGX6 335 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 SLC25A40Q8TBP6 338 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 OR5P3Q8WZ94 311 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 MARS2Q96GW9 593 aaKnown RBP13.06□□□□□ -0.32
SCLT1-209ENST00000511426 OR2J1Q9GZK6 312 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 AUNIPQ9H7T9 357 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 COPZ2Q9P299 210 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 MTFP1Q9UDX5 166 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 MGAQ8IWI9 3026 aa13.06□□□□□ -0.32
SCLT1-209ENST00000511426 TPD52L2O43399 206 aaKnown RBP13.05□□□□□ -0.32
SCLT1-209ENST00000511426 CA11O75493 328 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 CRTAPO75718 401 aaPredicted RBP13.05□□□□□ -0.32
SCLT1-209ENST00000511426 RBBP9O75884 186 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 MPIG6BO95866 241 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 CYB5AP00167 134 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 FAM157BP0CG42 384 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 MGMTP16455 207 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 CHRNB4P30926 498 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 FAUP35544 74 aaKnown RBP13.05□□□□□ -0.32
SCLT1-209ENST00000511426 FAM27E3Q08E93 113 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 RSU1Q15404 277 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 PNLIPRP3Q17RR3 467 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 SLC22A6Q4U2R8 563 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 IZUMO1Q8IYV9 350 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 SPERTQ8NA61 448 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 OR52I2Q8NH67 350 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 ENKURQ8TC29 256 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 KLF14Q8TD94 323 aaPredicted RBP13.05□□□□□ -0.32
SCLT1-209ENST00000511426 GPX8Q8TED1 209 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 AQP3Q92482 292 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 CMBLQ96DG6 245 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 LRRC46Q96FV0 321 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 C11orf54Q9H0W9 315 aaPredicted RBP13.05□□□□□ -0.32
SCLT1-209ENST00000511426 POFUT1Q9H488 388 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms