RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 WDR25Q64LD2 544 aaPredicted RBP7.15□□□□□ -1.26
PDPN-209ENST00000510906 FAHD1Q6P587 224 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 LRRN1Q6UXK5 716 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 ZNF841Q6ZN19 808 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 DCDC5Q6ZRR9 648 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 USP43Q70EL4 1123 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 WDR86Q86TI4 376 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 CMTM4Q8IZR5 234 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 SIGLECL1Q8N7X8 197 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 ZDHHC22Q8N966 263 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 SPERTQ8NA61 448 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 THEM6Q8WUY1 208 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 ZFAND2BQ8WV99 257 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 RAB40AQ8WXH6 277 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 PGAM5Q96HS1 289 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 PLEKHA8Q96JA3 519 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 MRI1Q9BV20 369 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 TVP23BQ9NYZ1 205 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 CTSZQ9UBR2 303 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 CLN8Q9UBY8 286 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 NUP50Q9UKX7 468 aa7.15□□□□□ -1.26
PDPN-209ENST00000510906 BIRC6Q9NR09 4857 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 hCG_1807616A0A1W2PRN6 198 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 CCDC182A6NF36 153 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 H3BUI4 141 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 TRIM77I1YAP6 450 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 M0R129 80 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 MITFO75030 526 aaPredicted RBP7.14□□□□□ -1.27
PDPN-209ENST00000510906 APOC1P02654 83 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 IGHV4-38-2P0DP08 117 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 EGR1P18146 543 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 CPT2P23786 658 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 PSMB10P40306 273 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 CRISP1P54107 249 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 ACTG1P63261 375 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 CSNK2BP67870 215 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 APOFQ13790 326 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 OR8B8Q15620 311 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 SNAPC1Q16533 368 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 SLC35D3Q5M8T2 416 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 BTNL3Q6UXE8 466 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 RHOUQ7L0Q8 258 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 BCDIN3DQ7Z5W3 292 aaKnown RBP7.14□□□□□ -1.27
PDPN-209ENST00000510906 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.14□□□□□ -1.27
PDPN-209ENST00000510906 C11orf53Q8IXP5 236 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 GCSAMQ8N6F7 178 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 OR52H1Q8NGJ2 320 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 OR8S1Q8NH09 359 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 OR5K1Q8NHB7 308 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 FAM216AQ8WUB2 273 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 NRBF2Q96F24 287 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 NUDT16L1Q9BRJ7 211 aaKnown RBP7.14□□□□□ -1.27
PDPN-209ENST00000510906 MMADHCQ9H3L0 296 aaPredicted RBP7.14□□□□□ -1.27
PDPN-209ENST00000510906 SP140LQ9H930 580 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 PAPOLBQ9NRJ5 636 aaKnown RBP7.14□□□□□ -1.27
PDPN-209ENST00000510906 KIF17Q9P2E2 1029 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 RHBDD3Q9Y3P4 386 aa7.14□□□□□ -1.27
PDPN-209ENST00000510906 SOX21Q9Y651 276 aaPredicted RBP7.14□□□□□ -1.27
PDPN-209ENST00000510906 IGHV3OR15-7A0A075B7D8 119 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 KIR2DS1A0A191URI9 304 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 OOEPA6NGQ2 149 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 PRR32B1ATL7 298 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 PSMD9O00233 223 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 F2RL2O00254 374 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 PHYHO14832 338 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 TNFRSF13BO14836 293 aaPredicted RBP7.13□□□□□ -1.27
PDPN-209ENST00000510906 ADAM20O43506 726 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 PRKYO43930 277 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 FCN3O75636 299 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 GYPAP02724 150 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 MRPL3P09001 348 aaKnown RBP7.13□□□□□ -1.27
PDPN-209ENST00000510906 ALOX5APP20292 161 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 CFL1P23528 166 aaKnown RBP7.13□□□□□ -1.27
PDPN-209ENST00000510906 ACKR3P25106 362 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 EPHA2P29317 976 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 FGF12P61328 243 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 UBA52P62987 128 aaKnown RBP7.13□□□□□ -1.27
PDPN-209ENST00000510906 ELF3P78545 371 aaPredicted RBP7.13□□□□□ -1.27
PDPN-209ENST00000510906 PTGES3Q15185 160 aaKnown RBP7.13□□□□□ -1.27
PDPN-209ENST00000510906 ATP6AP1Q15904 470 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 C12orf54Q6X4T0 127 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 DOK3Q7L591 496 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 AMIGO2Q86SJ2 522 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 PARP8Q8N3A8 854 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 OR1M1Q8NGA1 313 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 OR8B12Q8NGG6 310 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 LRRC29Q8WV35 223 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 DNAJC9Q8WXX5 260 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 UPRTQ96BW1 309 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 SEH1LQ96EE3 360 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 LYZL4Q96KX0 146 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 C1orf147Q96MC9 270 aaPredicted RBP7.13□□□□□ -1.27
PDPN-209ENST00000510906 ZNF48Q96MX3 618 aaPredicted RBP7.13□□□□□ -1.27
PDPN-209ENST00000510906 TECTBQ96PL2 329 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 DUX5Q96PT3 197 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 TEAD3Q99594 435 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 ARPC5LQ9BPX5 153 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 PAPOLGQ9BWT3 736 aaKnown RBP7.13□□□□□ -1.27
PDPN-209ENST00000510906 TEX12Q9BXU0 123 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 TTTY10Q9BZA0 68 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms