RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 SPEM1Q8N4L4 309 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 SSX7Q7RTT5 188 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 DEFB108BQ8NET1 73 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 FAM27D1Q5T7N8 215 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 KISS1RQ969F8 398 aaPredicted RBP18.04■□□□□ 0.48
RNF40-203ENST00000493683 KTI12Q96EK9 354 aaPredicted RBP18.04■□□□□ 0.48
RNF40-203ENST00000493683 GPR137Q96N19 417 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 HES4Q9HCC6 221 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 MRPL22Q9NWU5 206 aaKnown RBP18.04■□□□□ 0.48
RNF40-203ENST00000493683 RASL12Q9NYN1 266 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 ING1Q9UK53 422 aaPredicted RBP18.04■□□□□ 0.48
RNF40-203ENST00000493683 DHRS3O75911 302 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 CARFQ8N187 725 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 IER2Q9BTL4 223 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 SLC45A2Q9UMX9 530 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 A0A1B0GTL3 188 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 ASPDHA6ND91 283 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 CSF2RBP32927 897 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 HLXQ14774 488 aaPredicted RBP18.04■□□□□ 0.48
RNF40-203ENST00000493683 WDR38Q5JTN6 314 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 PLEKHB1Q9UF11 243 aaPredicted RBP18.04■□□□□ 0.48
RNF40-203ENST00000493683 WSB1Q9Y6I7 421 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 TOX3O15405 576 aaPredicted RBP18.03■□□□□ 0.48
RNF40-203ENST00000493683 MYOGP15173 224 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 AVPR2P30518 371 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 RNPS1Q15287 305 aaKnown RBP18.03■□□□□ 0.48
RNF40-203ENST00000493683 ATP6V1FQ16864 119 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 CHAC2Q8WUX2 184 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 AAMDCQ9H7C9 122 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.03■□□□□ 0.48
RNF40-203ENST00000493683 TMEM272A0A1B0GTI8 110 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 SPRY1O43609 319 aaPredicted RBP18.03■□□□□ 0.48
RNF40-203ENST00000493683 DUSP2Q05923 314 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 TRA2AQ13595 282 aaKnown RBP eCLIP18.03■□□□□ 0.48
RNF40-203ENST00000493683 FBXL14Q8N1E6 418 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 UBAC2Q8NBM4 344 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 SLC35B3Q9H1N7 401 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 MKRN2OSH3BPM6 223 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 RGS13O14921 159 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 GPANK1O95872 356 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 EPPINO95925 133 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 SMIM17P0DL12 118 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 RAB7AP51149 207 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 MRM1Q6IN84 353 aaKnown RBP18.03■□□□□ 0.48
RNF40-203ENST00000493683 ZNF707Q96C28 371 aaPredicted RBP18.03■□□□□ 0.48
RNF40-203ENST00000493683 MARVELD1Q9BSK0 173 aa18.03■□□□□ 0.48
RNF40-203ENST00000493683 SSC5DA1L4H1 1573 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 PEX11BO96011 259 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 RAE1P78406 368 aaKnown RBP18.02■□□□□ 0.48
RNF40-203ENST00000493683 LRRC10Q5BKY1 277 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 FKBP11Q9NYL4 201 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 PHOX2AO14813 284 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 GFERP55789 205 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 C21orf58P58505 322 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 ZNF816Q0VGE8 651 aaPredicted RBP18.02■□□□□ 0.48
RNF40-203ENST00000493683 BCL7CQ8WUZ0 217 aaPredicted RBP18.02■□□□□ 0.48
RNF40-203ENST00000493683 ZNF426Q9BUY5 554 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 R3HDMLQ9H3Y0 253 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 WNT3P56703 355 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 HIST1H3AP68431 136 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 TMEM241Q24JQ0 296 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 PRSS54Q6PEW0 395 aa18.02■□□□□ 0.48
RNF40-203ENST00000493683 BCL2L2Q92843 193 aaPredicted RBP18.02■□□□□ 0.48
RNF40-203ENST00000493683 ZNF764Q96H86 408 aaPredicted RBP18.02■□□□□ 0.48
RNF40-203ENST00000493683 PHIPQ8WWQ0 1821 aa18.02■□□□□ 0.47
RNF40-203ENST00000493683 DUS4LO95620 317 aaKnown RBP18.02■□□□□ 0.47
RNF40-203ENST00000493683 GPM6AP51674 278 aa18.02■□□□□ 0.47
RNF40-203ENST00000493683 DHRS2Q13268 280 aa18.02■□□□□ 0.47
RNF40-203ENST00000493683 KISS1Q15726 138 aa18.02■□□□□ 0.47
RNF40-203ENST00000493683 GSG1Q2KHT4 349 aa18.02■□□□□ 0.47
RNF40-203ENST00000493683 PRR27Q6MZM9 219 aa18.02■□□□□ 0.47
RNF40-203ENST00000493683 WFDC8Q8IUA0 241 aa18.02■□□□□ 0.47
RNF40-203ENST00000493683 TAAR3PQ9P1P4 343 aa18.02■□□□□ 0.47
RNF40-203ENST00000493683 KCNE1BA0A087WTH5 132 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 IGHV3-15A0A0B4J1V0 119 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 SHISA7A6NL88 538 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 CTDSPLO15194 276 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 FGF2P09038 288 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 NQO2P16083 231 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 PAX5Q02548 391 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 TMEM196Q5HYL7 178 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 MYEOVQ96EZ4 313 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 MBTPS2O43462 519 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 CST7O76096 145 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 WNT1P04628 370 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 PTHLHP12272 177 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 ST3GAL2Q16842 350 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 CTAG2O75638 210 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 PIAS2O75928 621 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 OR10AD1Q8NGE0 317 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 ORAI1Q96D31 301 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 TEX50A0A1B0GTY4 177 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 C9orf170A2RU37 121 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 METTL12A8MUP2 240 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 NDUFB3O43676 98 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 SOX15O60248 233 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 B3GALNT1O75752 331 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 PTGFRP43088 359 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 KIAA0040Q15053 153 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 SURF2Q15527 256 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms