RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 PGBD5Q8N414 524 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 ZNF557Q8N988 423 aaPredicted RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 NPEPL1Q8NDH3 523 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 PXT1Q8NFP0 134 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 OR4M2Q8NGB6 313 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 OR52B6Q8NGF0 335 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 OR51D1Q8NGF3 324 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 OR10V1Q8NGI7 309 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 OR4Q3Q8NH05 313 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 OR10J5Q8NHC4 309 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 RNASE11Q8TAA1 199 aaKnown RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 MRGPRDQ8TDS7 321 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 EEF1AKMT1Q8WVE0 214 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 ACOT12Q8WYK0 555 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 TFGQ92734 400 aaPredicted RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 UFD1Q92890 307 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 RBPMSQ93062 196 aaKnown RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 GRAMD2BQ96HH9 432 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 FCRL1Q96LA6 429 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 OR2M2Q96R28 347 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 OR5M11Q96RB7 305 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 CLCC1Q96S66 551 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 DDA1Q9BW61 102 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 BEX2Q9BXY8 128 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 BCL2L14Q9BZR8 327 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 ZYG11BQ9C0D3 744 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 MIXL1Q9H2W2 232 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 RNF167Q9H6Y7 350 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 RDH14Q9HBH5 336 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 SPANXB1Q9NS25 103 aaPredicted RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 MCUBQ9NWR8 336 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 C2orf42Q9NWW7 574 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 RNF186Q9NXI6 227 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 IL36GQ9NZH8 169 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 COPZ2Q9P299 210 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 BTNL2Q9UIR0 455 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 LSM2Q9Y333 95 aaKnown RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 OARD1Q9Y530 152 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 OR1A2Q9Y585 309 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 ALPK3Q96L96 1907 aa4.09□□□□□ -1.76
RTN4-215ENST00000491592 IGLV3-10A0A075B6K4 115 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 A0A1B0GW55 424 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 C7orf66A4D0T2 115 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 NPIPA5E9PKD4 350 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 PLPP3O14495 311 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 FABP7O15540 132 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 TGOLN2O43493 480 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 GPR137BO60478 399 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 CDRT1O95170 752 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 LGALS2P05162 132 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 HOXD4P09016 255 aaPredicted RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 CT62P0C5K7 136 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 DUX4L2P0CJ85 424 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 DUX4L3P0CJ86 424 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 DUX4L4P0CJ87 422 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 DUX4L5P0CJ88 424 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 DUX4L6P0CJ89 424 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 DUX4L7P0CJ90 424 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 SLC2A1P11166 492 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 IFI30P13284 250 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 HIST1H1CP16403 213 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 RAB3AP20336 220 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 DAP3P51398 398 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 AP1S2P56377 157 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 SMIM11AP58511 58 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 SNRPD2P62316 118 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 SLC10A7Q0GE19 358 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 ZP4Q12836 540 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 RAB31Q13636 194 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 TPBGQ13641 420 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 ZNF235Q14590 738 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 TOMM34Q15785 309 aaPredicted RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 EIF2S3LQ2VIR3 472 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 ZNF672Q499Z4 452 aaPredicted RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 ACSM3Q53FZ2 586 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 TCEAL6Q6IPX3 200 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 SLC27A4Q6P1M0 643 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 KCTD18Q6PI47 426 aaPredicted RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 SBSNQ6UWP8 590 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 PAMR1Q6UXH9 720 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 TMEM64Q6YI46 380 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 NUFIP2Q7Z417 695 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 MMD2Q8IY49 270 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 PUSL1Q8N0Z8 303 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 C2orf73Q8N5S3 287 aaPredicted RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 KRTCAP2Q8N6L1 136 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 OR2L5Q8NG80 312 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 OR6K6Q8NGW6 343 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 PPTC7Q8NI37 304 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 PLPPR1Q8TBJ4 325 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 SPPL2AQ8TCT8 520 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 CD200R1Q8TD46 325 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 GEMIN6Q8WXD5 167 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 UCN3Q969E3 161 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 CXorf40BQ96DE9 158 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 BPIFA2Q96DR5 249 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 ZBED6CLQ96FA7 236 aaPredicted RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 SCMH1Q96GD3 660 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 PCED1BQ96HM7 432 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 ZNF75AQ96N20 296 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms