RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 TBPL2Q6SJ96 375 aa10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 DRAM2Q6UX65 266 aa10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 C16orf89Q6UX73 402 aa10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 CCDC80Q76M96 950 aa10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 ADCK1Q86TW2 530 aa10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 NDNFQ8TB73 568 aa10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 SPSB4Q96A44 273 aa10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 RBM14Q96PK6 669 aaKnown RBP10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 MICU1Q9BPX6 476 aa10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 PAPOLGQ9BWT3 736 aaKnown RBP10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 FGF23Q9GZV9 251 aaPredicted RBP10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 OPA3Q9H6K4 179 aa10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 NRIP3Q9NQ35 241 aa10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 BAG5Q9UL15 447 aa10.77□□□□□ -0.69
EXOSC3-207ENST00000490516 TBX1O43435 398 aa10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 OR2F2O95006 317 aa10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 IGHV1-8P0DP01 117 aa10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 YAP1P46937 504 aaKnown RBP10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 SLC18A1P54219 525 aa10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 STX1BP61266 288 aa10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 THAP5Q7Z6K1 395 aa10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 CD177Q8N6Q3 437 aa10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 OR4Q3Q8NH05 313 aa10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 PAIP2Q9BPZ3 127 aaKnown RBP10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 RTL8AQ9BWD3 113 aa10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 TBC1D23Q9NUY8 699 aa10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 LINC00527Q9UJ94 153 aa10.76□□□□□ -0.69
EXOSC3-207ENST00000490516 LDLRAD4O15165 306 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 XRCC2O43543 280 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 SNNO75324 88 aaPredicted RBP10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 PTP4A3O75365 173 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 HLA-DQA2P01906 255 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 TROVE2P10155 538 aaKnown RBP eCLIP10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 MRPL19P49406 292 aaKnown RBP10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 SLC7A2P52569 658 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 VMACQ2NL98 169 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 SLC36A3Q495N2 470 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 MINOS1Q5TGZ0 78 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 LCN8Q6JVE9 175 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 LCNL1Q6ZST4 164 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 KCTD8Q6ZWB6 473 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 CALHM1Q8IU99 346 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 OR10A6Q8NH74 314 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 STMN2Q93045 179 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 PRRC1Q96M27 445 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 NSRP1Q9H0G5 558 aaKnown RBP10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 C1orf21Q9H246 121 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 KAT8Q9H7Z6 458 aaKnown RBP10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 DCLRE1BQ9H816 532 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 THAP1Q9NVV9 213 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 MRPL22Q9NWU5 206 aaKnown RBP10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 MINOS1-NBL1R4GNA1 71 aa10.75□□□□□ -0.69
EXOSC3-207ENST00000490516 A0A087WUU8 490 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 TRIM64CA6NLI5 447 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 ANXA2P2A6NMY6 339 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 PRR23D1E9PI22 279 aaPredicted RBP10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 J3KTA2 159 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 NDUFB2O95178 105 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 PRR23D2P0DMB1 279 aaPredicted RBP10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 PSKH1P11801 424 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 DCTDP32321 178 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 GZMMP51124 257 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 KLHL12Q53G59 568 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 ZNF730Q6ZMV8 503 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 LINC00471Q8N535 108 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 OR8U1Q8NH10 309 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 CHPT1Q8WUD6 406 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 GATAD1Q8WUU5 269 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 LINC00476Q8WZB0 136 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 SGK3Q96BR1 496 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 RNFT2Q96EX2 444 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 REEP6Q96HR9 211 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 COPS4Q9BT78 406 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 NDEL1Q9GZM8 345 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 FN3KQ9H479 309 aa10.74□□□□□ -0.69
EXOSC3-207ENST00000490516 hCG_38984A0A1B0GV85 526 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 RFPL4AA6NLU0 287 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 TMEM210A6NLX4 147 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 ZNF850A8MQ14 1090 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 RFPL4AL1F8VTS6 287 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 SLC22A2O15244 555 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 TXNDC12O95881 172 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 ZNF823P16415 610 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 NOS3P29474 1203 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 GSK3AP49840 483 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 FXYD6P3P58550 94 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 ACTA2P62736 377 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 ACTG2P63267 376 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 ACTC1P68032 377 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 ACTA1P68133 377 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 TRAM2Q15035 370 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 TIGD6Q17RP2 521 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 AGKQ53H12 422 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 FAM76BQ5HYJ3 339 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 MBOAT2Q6ZWT7 520 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 OR5P3Q8WZ94 311 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 LZICQ8WZA0 190 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 FAM46AQ96IP4 442 aaKnown RBP10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 RNF170Q96K19 258 aa10.73□□□□□ -0.69
EXOSC3-207ENST00000490516 GPX7Q96SL4 187 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms