RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 APOBEC1P41238 236 aaKnown RBP17.21■□□□□ 0.35
HMG20B-213ENST00000488973 TAS2R46P59540 309 aa17.21■□□□□ 0.35
HMG20B-213ENST00000488973 S100A10P60903 97 aa17.21■□□□□ 0.35
HMG20B-213ENST00000488973 ARFRP1Q13795 201 aa17.21■□□□□ 0.35
HMG20B-213ENST00000488973 TMEM268Q5VZI3 342 aa17.21■□□□□ 0.35
HMG20B-213ENST00000488973 KDF1Q8NAX2 398 aaPredicted RBP17.21■□□□□ 0.35
HMG20B-213ENST00000488973 EMG1Q92979 244 aaKnown RBP17.21■□□□□ 0.35
HMG20B-213ENST00000488973 ADAMTS9Q9P2N4 1935 aa17.21■□□□□ 0.35
HMG20B-213ENST00000488973 ZNF878C9JN71 531 aa17.21■□□□□ 0.35
HMG20B-213ENST00000488973 CD80P33681 288 aa17.21■□□□□ 0.35
HMG20B-213ENST00000488973 BIDP55957 195 aa17.21■□□□□ 0.35
HMG20B-213ENST00000488973 SURF2Q15527 256 aaPredicted RBP17.21■□□□□ 0.35
HMG20B-213ENST00000488973 HMGN3Q15651 99 aa17.21■□□□□ 0.35
HMG20B-213ENST00000488973 C5orf34Q96MH7 638 aa17.21■□□□□ 0.35
HMG20B-213ENST00000488973 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.21■□□□□ 0.35
HMG20B-213ENST00000488973 GSKIPQ9P0R6 139 aa17.21■□□□□ 0.35
HMG20B-213ENST00000488973 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 GAPDHP04406 335 aaKnown RBP17.2■□□□□ 0.34
HMG20B-213ENST00000488973 GLRA1P23415 457 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 CSNK1EP49674 416 aaKnown RBP17.2■□□□□ 0.34
HMG20B-213ENST00000488973 DHRS11Q6UWP2 260 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 LYPD6BQ8NI32 183 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 KIRREL1Q96J84 757 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 CACFD1Q9UGQ2 172 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 B3GALT5Q9Y2C3 310 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 TIMM10BQ9Y5J6 103 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 KPTNQ9Y664 436 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 OR8U8P0C7N1 319 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 RCC1P18754 421 aaPredicted RBP17.2■□□□□ 0.34
HMG20B-213ENST00000488973 RAC1P63000 192 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 THEM4Q5T1C6 240 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 ABHD12BQ7Z5M8 362 aaPredicted RBP17.2■□□□□ 0.34
HMG20B-213ENST00000488973 FAM89BQ8N5H3 189 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 DDIT4LQ96D03 193 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 RHOVQ96L33 236 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 EMC6Q9BV81 110 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 MRPL13Q9BYD1 178 aaKnown RBP17.2■□□□□ 0.34
HMG20B-213ENST00000488973 CNTNAP3Q9BZ76 1288 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 DUSP15Q9H1R2 295 aaPredicted RBP17.2■□□□□ 0.34
HMG20B-213ENST00000488973 LHFPL6Q9Y693 200 aa17.2■□□□□ 0.34
HMG20B-213ENST00000488973 CEP290O15078 2479 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 A0A1W2PP11 408 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 PPIHO43447 177 aaKnown RBP17.19■□□□□ 0.34
HMG20B-213ENST00000488973 CRTAPO75718 401 aaPredicted RBP17.19■□□□□ 0.34
HMG20B-213ENST00000488973 JTBO76095 146 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 HCKP08631 526 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 HOXB5P09067 269 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 PMELP40967 661 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 COTL1Q14019 142 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 RBM39Q14498 530 aaKnown RBP17.19■□□□□ 0.34
HMG20B-213ENST00000488973 TOLLIPQ9H0E2 274 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 METTL9Q9H1A3 318 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 OR10A2Q9H208 303 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 GFOD1Q9NXC2 390 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 MMP17Q9ULZ9 603 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 C9JQL5 133 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 ZNF708P17019 499 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 CSNK2A1P68400 391 aaPredicted RBP17.19■□□□□ 0.34
HMG20B-213ENST00000488973 COMMD2Q86X83 199 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 CSNK2A3Q8NEV1 391 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 OR8B12Q8NGG6 310 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 OR6X1Q8NH79 312 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 SSC4DQ8WTU2 575 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 GPR84Q9NQS5 396 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 C1orf123Q9NWV4 160 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 ALKBH4Q9NXW9 302 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 EHFQ9NZC4 300 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 MTCH2Q9Y6C9 303 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 SLCO1B1Q9Y6L6 691 aa17.19■□□□□ 0.34
HMG20B-213ENST00000488973 A0A1W2PNV4 684 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 IGLV3-19P01714 112 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 SFTPBP07988 381 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 GIMD1P0DJR0 217 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 FBLP22087 321 aaKnown RBP17.18■□□□□ 0.34
HMG20B-213ENST00000488973 CCL1P22362 96 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 RPL12P30050 165 aaKnown RBP17.18■□□□□ 0.34
HMG20B-213ENST00000488973 PPT1P50897 306 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 SNU13P55769 128 aaKnown RBP17.18■□□□□ 0.34
HMG20B-213ENST00000488973 C17orf67Q0P5P2 114 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 OR2AJ1Q8NGZ0 328 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 SLAMF9Q96A28 289 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 C14orf79Q96F83 325 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 GPER1Q99527 375 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 ST6GALNAC5Q9BVH7 336 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 SERINC1Q9NRX5 453 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 SUSD2Q9UGT4 822 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 CYP8B1Q9UNU6 501 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 LIPT2A6NK58 231 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 SDCBPO00560 298 aaPredicted RBP17.18■□□□□ 0.34
HMG20B-213ENST00000488973 AGPAT2O15120 278 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 ZNF17P17021 662 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 DHPSP49366 369 aaPredicted RBP17.18■□□□□ 0.34
HMG20B-213ENST00000488973 RAB5CP51148 216 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 SUMO3P55854 103 aaPredicted RBP17.18■□□□□ 0.34
HMG20B-213ENST00000488973 Q6ZRG5 221 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 MRPL37Q9BZE1 423 aaKnown RBP17.18■□□□□ 0.34
HMG20B-213ENST00000488973 RAB33BQ9H082 229 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 PLA2G2EQ9NZK7 142 aa17.18■□□□□ 0.34
HMG20B-213ENST00000488973 A0A1W2PPC4 97 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 K7EPK0 472 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms