RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 MAB21L1Q13394 359 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 CCDC92Q53HC0 331 aaPredicted RBP16.7■□□□□ 0.26
CCM2-216ENST00000488727 ELFN2Q5R3F8 820 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 BCL2L15Q5TBC7 163 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 OLFML2AQ68BL7 652 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 ASPHD2Q6ICH7 369 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 CFAP77Q6ZQR2 320 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 BEX2Q9BXY8 128 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 GDF2Q9UK05 429 aaPredicted RBP16.7■□□□□ 0.26
CCM2-216ENST00000488727 CENPEQ02224 2701 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 ABCD4O14678 606 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 CTAG2O75638 210 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 GZMKP49863 264 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 NAAAQ02083 359 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 ZNF704Q6ZNC4 412 aaPredicted RBP16.7■□□□□ 0.26
CCM2-216ENST00000488727 SERPINA12Q8IW75 414 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 DEDD2Q8WXF8 326 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 PLEK2Q9NYT0 353 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 HHLA2Q9UM44 414 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 GTF2A1LQ9UNN4 478 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 FBN2P35556 2912 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 TRAV6A0A075B6T7 132 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 NBPF19A0A087WUL8 3843 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 ANKRD20A5PA0PJZ0 165 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 XRCC3O43542 346 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 SGCEO43556 437 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 PLAUP00749 431 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 MT-ND4P03905 459 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 GSTT2BP0CG30 244 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 CCL2P13500 99 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 CALCRP30988 508 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 RAB11BQ15907 218 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 NDUFA5Q16718 116 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 GJC3Q8NFK1 279 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 OR10S1Q8NGN2 331 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 OR2AJ1Q8NGZ0 328 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 OR56B4Q8NH76 319 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 C14orf79Q96F83 325 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 TMEM204Q9BSN7 226 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 HRASLSQ9HDD0 168 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 PNRC2Q9NPJ4 139 aaKnown RBP16.69■□□□□ 0.26
CCM2-216ENST00000488727 CKLFQ9UBR5 152 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 OR52A1Q9UKL2 312 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 FBXL3Q9UKT7 428 aa16.69■□□□□ 0.26
CCM2-216ENST00000488727 LOC100509620A0A075B734 347 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 IGHV2OR16-5A0A0B4J2B6 119 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 SYNGR3O43761 229 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 DOK2O60496 412 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 H2AFB2P0C5Z0 115 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 UBCP0CG48 685 aaKnown RBP16.68■□□□□ 0.26
CCM2-216ENST00000488727 MMP16P51512 607 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 PLP2Q04941 152 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 TMEM244Q5VVB8 128 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 CD276Q5ZPR3 534 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 GLT8D1Q68CQ7 371 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 ADAM5Q6NVV9 412 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 PIAS4Q8N2W9 510 aaPredicted RBP16.68■□□□□ 0.26
CCM2-216ENST00000488727 PAQR4Q8N4S7 273 aaPredicted RBP16.68■□□□□ 0.26
CCM2-216ENST00000488727 SLC30A7Q8NEW0 376 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 PPP1R14AQ96A00 147 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 MED28Q9H204 178 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 ROS1P08922 2347 aa16.68■□□□□ 0.26
CCM2-216ENST00000488727 LOC100289279A0A1B0GTE1 492 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 ATP6V1G2-DDX39BF2Z307 99 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 GOSR1O95249 250 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 CD3EP07766 207 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 H2BFMP0C1H6 154 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 PRF1P14222 555 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 STOMP27105 288 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 CCR6P51684 374 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 TLE4Q04727 773 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 TNK1Q13470 666 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 RAB35Q15286 201 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 ZFAND1Q8TCF1 268 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 ASH1LQ9NR48 2969 aaKnown RBP16.67■□□□□ 0.26
CCM2-216ENST00000488727 LOC107986453A0A1B0GWG9 222 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 MEGF11A6BM72 1044 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 OR6C6A6NF89 314 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 SHISA9B4DS77 424 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 GSTT2P0CG29 244 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 ZNF35P13682 527 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 GCDHQ92947 438 aaPredicted RBP16.67■□□□□ 0.26
CCM2-216ENST00000488727 SLC25A28Q96A46 364 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 POM121L2Q96KW2 1035 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 OR51J1Q9H342 316 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 SLA2Q9H6Q3 261 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 FAM206AQ9NX38 181 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 RNF115Q9Y4L5 304 aa16.67■□□□□ 0.26
CCM2-216ENST00000488727 PLCE1Q9P212 2302 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 H3BSH0 61 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 CRYAAP02489 173 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 HTR5AP47898 357 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 POU3F4P49335 361 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 PLA2G7Q13093 441 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 FCN2Q15485 313 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 ASCC1Q8N9N2 400 aaKnown RBP16.66■□□□□ 0.26
CCM2-216ENST00000488727 OR51D1Q8NGF3 324 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 LILRB1Q8NHL6 650 aaPredicted RBP16.66■□□□□ 0.26
CCM2-216ENST00000488727 NEUROG1Q92886 237 aa16.66■□□□□ 0.26
CCM2-216ENST00000488727 FAM3DQ96BQ1 224 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms