RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 RNF138Q8WVD3 245 aa2.85□□□□□ -1.95
CNOT4-209ENST00000473470 CCDC127Q96BQ5 260 aa2.85□□□□□ -1.95
CNOT4-209ENST00000473470 CAPZA3Q96KX2 299 aa2.85□□□□□ -1.95
CNOT4-209ENST00000473470 ZNF396Q96N95 335 aaPredicted RBP2.85□□□□□ -1.95
CNOT4-209ENST00000473470 ULBP1Q9BZM6 244 aa2.85□□□□□ -1.95
CNOT4-209ENST00000473470 SLC7A5P2Q9GIP4 190 aa2.85□□□□□ -1.95
CNOT4-209ENST00000473470 ASB7Q9H672 318 aa2.85□□□□□ -1.95
CNOT4-209ENST00000473470 INPP5EQ9NRR6 644 aa2.85□□□□□ -1.95
CNOT4-209ENST00000473470 PDP1Q9P0J1 537 aaPredicted RBP2.85□□□□□ -1.95
CNOT4-209ENST00000473470 DHCR7Q9UBM7 475 aaKnown RBP2.85□□□□□ -1.95
CNOT4-209ENST00000473470 NUFIP1Q9UHK0 495 aaKnown RBP2.85□□□□□ -1.95
CNOT4-209ENST00000473470 GNPTGQ9UJJ9 305 aa2.85□□□□□ -1.95
CNOT4-209ENST00000473470 PACSIN2Q9UNF0 486 aaPredicted RBP2.85□□□□□ -1.95
CNOT4-209ENST00000473470 FRAS1Q86XX4 4008 aa2.85□□□□□ -1.95
CNOT4-209ENST00000473470 DNAH9Q9NYC9 4486 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 ZNF407Q9C0G0 2248 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 PEX7O00628 323 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 AGTP01019 485 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 ALDOBP05062 364 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 GIPP09681 153 aaPredicted RBP2.84□□□□□ -1.95
CNOT4-209ENST00000473470 NELFEP18615 380 aaKnown RBP2.84□□□□□ -1.95
CNOT4-209ENST00000473470 GPX6P59796 221 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 MYL6P60660 151 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 TNNC1P63316 161 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 UNC119Q13432 240 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 SGCAQ16586 387 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 DEFB110Q30KQ9 67 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 VPS26BQ4G0F5 336 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.84□□□□□ -1.95
CNOT4-209ENST00000473470 RAET1LQ5VY80 246 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 ZFAND6Q6FIF0 208 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 FRMPD2BQ6IN97 320 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 C19orf35Q6ZS72 473 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 Q6ZSR3 168 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 CAMK2N1Q7Z7J9 78 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 CD302Q8IX05 232 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 LIX1Q8N485 282 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 LRRC52Q8N7C0 313 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 CCDC148Q8NFR7 591 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 OR7G2Q8NG99 324 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 MCOLN3Q8TDD5 553 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 ELMO1Q92556 727 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 ZNF514Q96K75 400 aaPredicted RBP2.84□□□□□ -1.95
CNOT4-209ENST00000473470 COL21A1Q96P44 957 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 ECSITQ9BQ95 431 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 SLC25A39Q9BZJ4 359 aaPredicted RBP2.84□□□□□ -1.95
CNOT4-209ENST00000473470 RBAKQ9NYW8 714 aaPredicted RBP2.84□□□□□ -1.95
CNOT4-209ENST00000473470 ANKRD12Q6UB98 2062 aa2.84□□□□□ -1.95
CNOT4-209ENST00000473470 IGKV1D-13A0A0B4J2D9 117 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 A0A0D9SEW6 157 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 ZNF726A6NNF4 738 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 C9J4A7 227 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 C9JVG2 144 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 DLGAP1O14490 977 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 RNF13O43567 381 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 CA11O75493 328 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 EIF3GO75821 320 aaKnown RBP eCLIP2.83□□□□□ -1.96
CNOT4-209ENST00000473470 PABPC4LP0CB38 370 aaKnown RBP2.83□□□□□ -1.96
CNOT4-209ENST00000473470 IGHV3-43DP0DP04 118 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 IGKV1-13P0DP09 117 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 OMGP23515 440 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 CSNK1DP48730 415 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 FGF8P55075 233 aaPredicted RBP2.83□□□□□ -1.96
CNOT4-209ENST00000473470 ZNF92Q03936 586 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 CUL2Q13617 745 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 LRRC66Q68CR7 880 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 SPOPLQ6IQ16 392 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 CNIH2Q6PI25 160 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 SASS6Q6UVJ0 657 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 H2AFVQ71UI9 128 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 BBS5Q8N3I7 341 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 GTPBP8Q8N3Z3 284 aaPredicted RBP2.83□□□□□ -1.96
CNOT4-209ENST00000473470 OR4C5Q8NGB2 326 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 PSMF1Q92530 271 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 TMEM54Q969K7 222 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 LRRC58Q96CX6 371 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 FAM210BQ96KR6 192 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 SH3GL3Q99963 347 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 RARRES2Q99969 163 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 RACGAP1Q9H0H5 632 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 METTL17Q9H7H0 456 aaPredicted RBP2.83□□□□□ -1.96
CNOT4-209ENST00000473470 UGT1A7Q9HAW7 530 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 UGT1A10Q9HAW8 530 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 UGT1A8Q9HAW9 530 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 CTPS2Q9NRF8 586 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 MED29Q9NX70 200 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 SLC25A37Q9NYZ2 338 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 TRAPPC4Q9Y296 219 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 FAM215AQ9Y5M1 114 aa2.83□□□□□ -1.96
CNOT4-209ENST00000473470 IGHV3-64DA0A0J9YX35 117 aa2.82□□□□□ -1.96
CNOT4-209ENST00000473470 A0A1B0GVI7 797 aa2.82□□□□□ -1.96
CNOT4-209ENST00000473470 EEF1E1-BLOC1S5C9J1V9 151 aa2.82□□□□□ -1.96
CNOT4-209ENST00000473470 H3BNH8 94 aa2.82□□□□□ -1.96
CNOT4-209ENST00000473470 CDC7O00311 574 aa2.82□□□□□ -1.96
CNOT4-209ENST00000473470 MAGEB4O15481 346 aaPredicted RBP2.82□□□□□ -1.96
CNOT4-209ENST00000473470 EEF1E1O43324 174 aaKnown RBP2.82□□□□□ -1.96
CNOT4-209ENST00000473470 TNNC2P02585 160 aa2.82□□□□□ -1.96
CNOT4-209ENST00000473470 CSF3P09919 207 aa2.82□□□□□ -1.96
CNOT4-209ENST00000473470 PSG2P11465 335 aa2.82□□□□□ -1.96
CNOT4-209ENST00000473470 OTX1P32242 354 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms