RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TSNAXQ99598 290 aaKnown RBP11.97□□□□□ -0.49
BRCA1-209ENST00000470026 ST6GALNAC5Q9BVH7 336 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 DUSP23Q9BVJ7 150 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 ZNF160Q9HCG1 818 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 SLC39A1Q9NY26 324 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 ZNF629Q9UEG4 869 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-209ENST00000470026 ASCC3Q8N3C0 2202 aaKnown RBP11.97□□□□□ -0.49
BRCA1-209ENST00000470026 STMND1H3BQB6 276 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 GPR31O00270 319 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 TP53I11O14683 189 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 PLATP00750 562 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 PET100P0DJ07 73 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 CPT2P23786 658 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 ECI1P42126 302 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 CSNK1A1P48729 337 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 RAB32Q13637 225 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 TMEM123Q8N131 208 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 BOLLQ8N9W6 283 aaKnown RBP11.96□□□□□ -0.49
BRCA1-209ENST00000470026 OR10Z1Q8NGY1 313 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 PAQR8Q8TEZ7 354 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 SMIM8Q96KF7 97 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 NECAB3Q96P71 396 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-209ENST00000470026 PRR13Q9NZ81 148 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 EHFQ9NZC4 300 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 LPAR3Q9UBY5 353 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 PCDHGA1Q9Y5H4 931 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 EYSQ5T1H1 3165 aa11.96□□□□□ -0.49
BRCA1-209ENST00000470026 K7ESF4 209 aa11.96□□□□□ -0.5
BRCA1-209ENST00000470026 TAAR5O14804 337 aa11.96□□□□□ -0.5
BRCA1-209ENST00000470026 EPHA8P29322 1005 aaPredicted RBP11.96□□□□□ -0.5
BRCA1-209ENST00000470026 SCRN3Q0VDG4 424 aa11.96□□□□□ -0.5
BRCA1-209ENST00000470026 PJVKQ0ZLH3 352 aa11.96□□□□□ -0.5
BRCA1-209ENST00000470026 GUCA2BQ16661 112 aa11.96□□□□□ -0.5
BRCA1-209ENST00000470026 GFOD2Q3B7J2 385 aa11.96□□□□□ -0.5
BRCA1-209ENST00000470026 ZNF585AQ6P3V2 769 aa11.96□□□□□ -0.5
BRCA1-209ENST00000470026 LDLRAD3Q86YD5 345 aa11.96□□□□□ -0.5
BRCA1-209ENST00000470026 WDR54Q9H977 334 aa11.96□□□□□ -0.5
BRCA1-209ENST00000470026 FOXD3Q9UJU5 478 aaPredicted RBP11.96□□□□□ -0.5
BRCA1-209ENST00000470026 KLF2Q9Y5W3 355 aaPredicted RBP11.96□□□□□ -0.5
BRCA1-209ENST00000470026 SDCBPO00560 298 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-209ENST00000470026 VAMP5O95183 116 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 HTR3BO95264 441 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 PTGER4P35408 488 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 SRSF3P84103 164 aaKnown RBP11.95□□□□□ -0.5
BRCA1-209ENST00000470026 DHRS7BQ6IAN0 325 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-209ENST00000470026 PPP1R3BQ86XI6 285 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 OR5D18Q8NGL1 313 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 OR51F2Q8NH61 342 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 SHDQ96IW2 340 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 CCDC74BQ96LY2 380 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 ANGPTL4Q9BY76 406 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 NDRG3Q9UGV2 375 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 EML6Q6ZMW3 1958 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 OR5H15A6NDH6 313 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 DHRS7CA6NNS2 312 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 DHHO43323 396 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 EIF1BO60739 113 aaKnown RBP11.95□□□□□ -0.5
BRCA1-209ENST00000470026 APOC1P02654 83 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 FAHP16930 419 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 HFEQ30201 348 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 PRAMEF20Q5VT98 475 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 CLDN23Q96B33 292 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 INTS12Q96CB8 462 aaKnown RBP11.95□□□□□ -0.5
BRCA1-209ENST00000470026 Q96M66 194 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 CNTNAP3BQ96NU0 1288 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 ZNF385AQ96PM9 386 aaKnown RBP11.95□□□□□ -0.5
BRCA1-209ENST00000470026 SEC11CQ9BY50 192 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 METTL8Q9H825 291 aaKnown RBP11.95□□□□□ -0.5
BRCA1-209ENST00000470026 AKIRIN1Q9H9L7 192 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-209ENST00000470026 PROK2Q9HC23 129 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 SH2D2AQ9NP31 389 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 ACKR4Q9NPB9 350 aa11.95□□□□□ -0.5
BRCA1-209ENST00000470026 MCTS1Q9ULC4 181 aaKnown RBP11.95□□□□□ -0.5
BRCA1-209ENST00000470026 IGKV1D-8A0A087WSZ0 117 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 MSTNO14793 375 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 CTSDP07339 412 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-209ENST00000470026 HKR1P10072 659 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 FCGR2AP12318 317 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 SERPINA2P20848 420 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 GUCA1AP43080 201 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-209ENST00000470026 EIF5AP63241 154 aaKnown RBP11.94□□□□□ -0.5
BRCA1-209ENST00000470026 RBM39Q14498 530 aaKnown RBP11.94□□□□□ -0.5
BRCA1-209ENST00000470026 CHRFAM7AQ494W8 412 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 SULF2Q8IWU5 870 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 TDHQ8IZJ6 230 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 IMMP1LQ96LU5 166 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 CNTNAP3Q9BZ76 1288 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 UBE2ZQ9H832 354 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-209ENST00000470026 WNT16Q9UBV4 365 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 TUBD1Q9UJT1 453 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 NXT1Q9UKK6 140 aaKnown RBP11.94□□□□□ -0.5
BRCA1-209ENST00000470026 MEMO1Q9Y316 297 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 PRELID3BQ9Y3B1 194 aa11.94□□□□□ -0.5
BRCA1-209ENST00000470026 F5H5K5 113 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 M0R135 149 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 ZIC3O60481 467 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 MTRF1O75570 445 aaKnown RBP11.93□□□□□ -0.5
BRCA1-209ENST00000470026 TRIOO75962 3097 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 FGF5P12034 268 aa11.93□□□□□ -0.5
BRCA1-209ENST00000470026 LIFP15018 202 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms