RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PDZD11Q5EBL8 140 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 NCR3LG1Q68D85 454 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR4S1Q8NGB4 309 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR10Z1Q8NGY1 313 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR5R1Q8NH85 324 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 GPR119Q8TDV5 335 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 NEIL1Q96FI4 390 aaPredicted RBP7.82□□□□□ -1.16
HPS4-209ENST00000466781 SEBOXQ9HB31 216 aaPredicted RBP7.82□□□□□ -1.16
HPS4-209ENST00000466781 FKBP11Q9NYL4 201 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 ICAM5Q9UMF0 924 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 C7orf72A4D263 438 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 K7ESF4 209 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 F2RL2O00254 374 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 ORM1P02763 201 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 SLC25A5P05141 298 aaKnown RBP7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR4A8P0C604 315 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 LIMS3P0CW19 117 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 LIMS4P0CW20 117 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 MDH2P40926 338 aaKnown RBP7.82□□□□□ -1.16
HPS4-209ENST00000466781 ERVFC1-1P60608 527 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 BAMBIQ13145 260 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 PNLIPRP3Q17RR3 467 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 GALNT16Q8N428 558 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 SIGLEC11Q96RL6 698 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 NKX6-2Q9C056 277 aaPredicted RBP7.82□□□□□ -1.16
HPS4-209ENST00000466781 TGIF2Q9GZN2 237 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 THYN1Q9P016 225 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 AMDHD2Q9Y303 409 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 LOC102723971A0A1B0GUV8 181 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 PDGFAP04085 211 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 LGALS7P47929 136 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 TUSC1Q2TAM9 212 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 ZNF260Q3ZCT1 412 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 FAM219BQ5XKK7 198 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 LYG1Q8N1E2 194 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 DYNC2LI1Q8TCX1 351 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 NUDCD2Q8WVJ2 157 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 C2orf50Q96LR7 162 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 SMIM7Q9BQ49 75 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 ZNF416Q9BWM5 594 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 MAGT1Q9H0U3 335 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 ACER3Q9NUN7 267 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 OR5V1Q9UGF6 321 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 LALBAP00709 142 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 RAB5AP20339 215 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 MPGP29372 298 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 AVPR2P30518 371 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 CEACAM6P40199 344 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 DHRS7BQ6IAN0 325 aaPredicted RBP7.81□□□□□ -1.16
HPS4-209ENST00000466781 BHLHA15Q7RTS1 189 aaPredicted RBP7.81□□□□□ -1.16
HPS4-209ENST00000466781 LILRB1Q8NHL6 650 aaPredicted RBP7.81□□□□□ -1.16
HPS4-209ENST00000466781 DYNLRB2Q8TF09 96 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 ADGRG7Q96K78 797 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 SLC22A13Q9Y226 551 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 TRPM7Q96QT4 1865 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 ONECUT2O95948 504 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 CD1EP15812 388 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 FAHP16930 419 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 ARNTP27540 789 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 BSGP35613 385 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 ID4P47928 161 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 ACOT7LQ6ZUV0 252 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.81□□□□□ -1.16
HPS4-209ENST00000466781 LRRTM1Q86UE6 522 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 TUSC5Q8IXB3 177 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 SYS1Q8N2H4 156 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 OR2M3Q8NG83 312 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 OR13G1Q8NGZ3 307 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 EXTL1Q92935 676 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 COA4Q9NYJ1 87 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 UPK1AO00322 258 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 EPHA8P29322 1005 aaPredicted RBP7.81□□□□□ -1.16
HPS4-209ENST00000466781 PCBP3P57721 371 aaKnown RBP7.81□□□□□ -1.16
HPS4-209ENST00000466781 OR5AP2Q8NGF4 316 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 COL11A1P12107 1806 aaPredicted RBP7.81□□□□□ -1.16
HPS4-209ENST00000466781 TGOLN2O43493 480 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 PSMB6P28072 239 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 DDOSTP39656 456 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 NXPH1P58417 271 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 FAM3AP98173 230 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 FUT7Q11130 342 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 RTP5Q14D33 572 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 STAC2Q6ZMT1 411 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 RBPMS2Q6ZRY4 209 aaKnown RBP7.81□□□□□ -1.16
HPS4-209ENST00000466781 MOB1BQ7L9L4 216 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 ANKRD37Q7Z713 158 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 TMEM102Q8N9M5 508 aaPredicted RBP7.81□□□□□ -1.16
HPS4-209ENST00000466781 OR13F1Q8NGS4 319 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 RXFP4Q8TDU9 374 aa7.81□□□□□ -1.16
HPS4-209ENST00000466781 A0A1W2PN81 502 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 hADV38S2A0JD32 116 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 ZNF320A2RRD8 509 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 SHISA8B8ZZ34 492 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 NGFP01138 241 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 CHRNA7P36544 502 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 SLC6A12P48065 614 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 DGCR2P98153 550 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 JMJD6Q6NYC1 403 aaPredicted RBP7.8□□□□□ -1.16
HPS4-209ENST00000466781 NHLRC1Q6VVB1 395 aa7.8□□□□□ -1.16
HPS4-209ENST00000466781 CALHM3Q86XJ0 350 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms