RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 CT45A7P0DMV0 189 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 HSPD1P10809 573 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 MYL2P10916 166 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF32P17041 273 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 PSMC3P17980 439 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 DTYMKP23919 212 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 TEAD1P28347 426 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 GPX4P36969 197 aaPredicted RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 EIF1P41567 113 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 GPR4P46093 362 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 RPL5P46777 297 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 CSNK1A1P48729 337 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 RGS6P49758 472 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 AKR1D1P51857 326 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF138P52744 262 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 ESRRGP62508 458 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 VSNL1P62760 191 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 RAP1AP62834 184 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 TNNC1P63316 161 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 XIAPP98170 497 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 STX4Q12846 297 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 TSPAN31Q12999 210 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 SELENBP1Q13228 472 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 PIGHQ14442 188 aaPredicted RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 TRAM2Q15035 370 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 PTGES3Q15185 160 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 QPRTQ15274 297 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 OR7A5Q15622 319 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 GOLGA7BQ2TAP0 167 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 PGGHGQ32M88 737 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 ALKBH6Q3KRA9 238 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 COQ5Q5HYK3 327 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 CT45A1Q5HYN5 189 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 RPL13AP3Q6NVV1 102 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 CYP4Z1Q86W10 505 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 DHFR2Q86XF0 187 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 PRSS58Q8IYP2 241 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 PRELID2Q8N945 189 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 TMEM35BQ8NCS4 154 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 NOXO1Q8NFA2 376 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 CT45A3Q8NHU0 189 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 NDNFQ8TB73 568 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 ABHD3Q8WU67 409 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 C22orf15Q8WYQ4 148 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 KIAA1143Q96AT1 154 aaPredicted RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 TESCQ96BS2 214 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 SGTBQ96EQ0 304 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 DUS3LQ96G46 650 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 SERPINB11Q96P15 392 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF317Q96PQ6 595 aaPredicted RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 SERPINI1Q99574 410 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 PDCD10Q9BUL8 212 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 CHAC1Q9BUX1 264 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 RGCCQ9H4X1 137 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 Q9H521 79 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 GEMIN7Q9H840 131 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 PATZ1Q9HBE1 687 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 BIN3Q9NQY0 253 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 MRPL22Q9NWU5 206 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 SDHAF2Q9NX18 166 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 TRMT112Q9UI30 125 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF229Q9UJW7 825 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 PSG8Q9UQ74 426 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 ST3GAL6Q9Y274 331 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 RBMX2Q9Y388 322 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 UTP11Q9Y3A2 253 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 POLR3HQ9Y535 204 aaPredicted RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 KDM5BQ9UGL1 1544 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF608Q9ULD9 1512 aaPredicted RBP2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 MAGI1Q96QZ7 1491 aaPredicted RBP2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 POLR3AO14802 1390 aaPredicted RBP2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 IGKV2D-24A0A075B6R9 120 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 A0A1W2PP18 115 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 RFPL4AA6NLU0 287 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 RFPL4AL1F8VTS6 287 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 M0QZ92 97 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 KPNA3O00505 521 aaPredicted RBP2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 PHYHO14832 338 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 SCAMP2O15127 329 aaKnown RBP2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 TCAPO15273 167 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 TOX3O15405 576 aaPredicted RBP2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 SGCEO43556 437 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 EIF4E2O60573 245 aaKnown RBP2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 BANF1O75531 89 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 CCNE2O96020 404 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 ARG1P05089 322 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 FBP1P09467 338 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 OR5H8P0DN80 308 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 THRAP10827 490 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 SLC2A1P11166 492 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF823P16415 610 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 CD36P16671 472 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 HSD11B1P28845 292 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 ACTR1BP42025 376 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 UQCRFS1P47985 274 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 ERFP50548 548 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 CLDN8P56748 225 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 SP4Q02446 784 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 SLAQ13239 276 aa2.28□□□□□ -2.04
HMGXB4-205ENST00000464480 EIF4EBP2Q13542 120 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms