RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 SLC25A28Q96A46 364 aa10.52□□□□□ -0.72
SMPD4-213ENST00000454468 SLC6A15Q9H2J7 730 aa10.52□□□□□ -0.72
SMPD4-213ENST00000454468 SLC7A11Q9UPY5 501 aa10.52□□□□□ -0.72
SMPD4-213ENST00000454468 FBXO24O75426 580 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 NXPH3O95157 252 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 SYNGR4O95473 234 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 RLN2P04090 185 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 FGF5P12034 268 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 TGIF1Q15583 401 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 TMPRSS7Q7RTY8 843 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 TMEM200AQ86VY9 491 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 TMEM185AQ8NFB2 350 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 OIT3Q8WWZ8 545 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 CMSS1Q9BQ75 279 aaKnown RBP10.52□□□□□ -0.73
SMPD4-213ENST00000454468 MRPL13Q9BYD1 178 aaKnown RBP10.52□□□□□ -0.73
SMPD4-213ENST00000454468 ABI3Q9P2A4 366 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 PIEZO2Q9H5I5 2752 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 ZIC3O60481 467 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 CELA3AP09093 270 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 SPATA46Q5T0L3 261 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 SLC25A47Q6Q0C1 308 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 TIPARPQ7Z3E1 657 aaKnown RBP10.52□□□□□ -0.73
SMPD4-213ENST00000454468 NAXDQ8IW45 347 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 PAQR4Q8N4S7 273 aaPredicted RBP10.52□□□□□ -0.73
SMPD4-213ENST00000454468 FNDC9Q8TBE3 224 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 GUCD1Q96NT3 240 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 NPDC1Q9NQX5 325 aaPredicted RBP10.52□□□□□ -0.73
SMPD4-213ENST00000454468 PTTG3PQ9NZH4 202 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 CSAG2Q9Y5P2 127 aa10.52□□□□□ -0.73
SMPD4-213ENST00000454468 A0A0A6YYH2 397 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 A0A1B0GTI1 187 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 A6NJ64 397 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 BET1O15155 118 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 ITGB2P05107 769 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 GLAP06280 429 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 HIST1H1DP16402 221 aaKnown RBP10.51□□□□□ -0.73
SMPD4-213ENST00000454468 RAC1P63000 192 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF260Q3ZCT1 412 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 FDX2Q6P4F2 183 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 CLEC9AQ6UXN8 241 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 OR13C8Q8NGS7 320 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 RNASE11Q8TAA1 199 aaKnown RBP10.51□□□□□ -0.73
SMPD4-213ENST00000454468 UBALD1Q8TB05 177 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 RBPMSQ93062 196 aaKnown RBP10.51□□□□□ -0.73
SMPD4-213ENST00000454468 UTP23Q9BRU9 249 aaKnown RBP10.51□□□□□ -0.73
SMPD4-213ENST00000454468 MS4A7Q9GZW8 240 aaPredicted RBP10.51□□□□□ -0.73
SMPD4-213ENST00000454468 LPAR5Q9H1C0 372 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 SLCO5A1Q9H2Y9 848 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 SDHAF2Q9NX18 166 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 LRP4O75096 1905 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 C5orf49A4QMS7 147 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 AIMP2Q13155 320 aaKnown RBP10.51□□□□□ -0.73
SMPD4-213ENST00000454468 UBE2V2Q15819 145 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 TSPO2Q5TGU0 170 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 FBXO17Q96EF6 278 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 HIST1H2AAQ96QV6 131 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 FOXB1Q99853 325 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF2Q9BSG1 426 aaPredicted RBP10.51□□□□□ -0.73
SMPD4-213ENST00000454468 PCDHB16Q9NRJ7 776 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 MLXQ9UH92 298 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 A0A1B0GW55 424 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 ARGFXA6NJG6 315 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 C3orf80F5H4A9 247 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 TNFSF15O95150 251 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 VAMP5O95183 116 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 DUX4L2P0CJ85 424 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 DUX4L3P0CJ86 424 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 DUX4L4P0CJ87 422 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 DUX4L5P0CJ88 424 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 DUX4L6P0CJ89 424 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 DUX4L7P0CJ90 424 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 GABRA1P14867 456 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF585AQ6P3V2 769 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 OR5AS1Q8N127 324 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 LILRB2Q8N423 598 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 SGCZQ96LD1 299 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 DUX4Q9UBX2 424 aa10.51□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF98A6NK75 572 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 PRSS44E7EML9 344 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 SHOXO15266 292 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 CHRM2P08172 466 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 SUCLG1P53597 346 aaKnown RBP10.5□□□□□ -0.73
SMPD4-213ENST00000454468 MLF1P58340 268 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 RIPPLY1Q0D2K3 151 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 AANATQ16613 207 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 PLAC9Q5JTB6 97 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 CDCP2Q5VXM1 449 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF385CQ66K41 422 aaPredicted RBP10.5□□□□□ -0.73
SMPD4-213ENST00000454468 SLC36A1Q7Z2H8 476 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 LYG2Q86SG7 212 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 LINC00518Q8N0U6 118 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 FBXL14Q8N1E6 418 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 SPICQ8N5J4 248 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 TERB2Q8NHR7 220 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 C9orf170A2RU37 121 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 IGFBP3P17936 291 aaPredicted RBP10.5□□□□□ -0.73
SMPD4-213ENST00000454468 MAGEA5P43359 124 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 SLC25A26Q70HW3 274 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 SULF2Q8IWU5 870 aa10.5□□□□□ -0.73
SMPD4-213ENST00000454468 OR51F2Q8NH61 342 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms