RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 TGFBR3LH3BV60 316 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CLDN34H7C241 214 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SMAD7O15105 426 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 CDS2O95674 445 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 IGHA1P01876 353 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ADRA2AP08913 450 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CXCL1P09341 107 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR2T7P0C7T2 308 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CD79AP11912 226 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 LSSP48449 732 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CXCR3P49682 368 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ELLP55199 621 aaPredicted RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 CDKN2DP55273 166 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SMIM11AP58511 58 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 LILRA4P59901 499 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PLP1P60201 277 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 RAC3P60763 192 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 RAB11AP62491 216 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 HSD11B2P80365 405 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 RPL24P83731 157 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 CDK3Q00526 305 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 RBPJQ06330 500 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ST3GAL3Q11203 375 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 UPP1Q16831 310 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CLEC12BQ2HXU8 276 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TP53I3Q53FA7 332 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SYT14P1Q58G82 188 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 VWA2Q5GFL6 755 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 RPUSD3Q6P087 351 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 SHISA6Q6ZSJ9 500 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 Q6ZSR9 355 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TMPRSS11BQ86T26 416 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 COMMD2Q86X83 199 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CILP2Q8IUL8 1156 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ZNF679Q8IYX0 411 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 CMTM4Q8IZR5 234 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 KLHDC1Q8N7A1 406 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 PNLDC1Q8NA58 520 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR4C16Q8NGL9 310 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR1N2Q8NGR9 330 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR6N1Q8NGY5 312 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR2AE1Q8NHA4 323 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 FAM213BQ8TBF2 198 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SYNPRQ8TBG9 265 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 SLC7A13Q8TCU3 470 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 GPX8Q8TED1 209 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ASB5Q8WWX0 329 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 MOB3AQ96BX8 217 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TVP23CQ96ET8 276 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 FAM46AQ96IP4 442 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 SUSD3Q96L08 255 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ORAI3Q9BRQ5 295 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ALG12Q9BV10 488 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR51I1Q9H343 314 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 TMEM38AQ9H6F2 299 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 METTL7AQ9H8H3 244 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 MTHFD2LQ9H903 347 aaPredicted RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 MBNL1Q9NR56 388 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 OR5V1Q9UGF6 321 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 VAX2Q9UIW0 290 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 LAMTOR2Q9Y2Q5 125 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 HDGFL3Q9Y3E1 203 aa2.49□□□□□ -2.01
LIG4-203ENST00000442234 ASH1LQ9NR48 2969 aaKnown RBP2.49□□□□□ -2.01
LIG4-203ENST00000442234 TANC1Q9C0D5 1861 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 TRAV14DV4A0A0A6YYC5 116 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 TRAV39A0A0B4J263 110 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 A0A1B0GTL3 188 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 TCRBV5S1A1TA0A578 114 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SHISA3A0PJX4 238 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 MBLAC1A4D2B0 266 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 RNF222A6NCQ9 220 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 H0Y8G0 127 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 H3BQ15 152 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 H7BY64 318 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 H7BYZ3 331 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 J3QR89 54 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CTSVO60911 334 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 HAND1O96004 215 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CD14P08571 375 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 HNRNPA1P09651 372 aaKnown RBP eCLIP2.48□□□□□ -2.01
LIG4-203ENST00000442234 AMD1P17707 334 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 PYCR1P32322 319 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 OR3A2P47893 321 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 PRLHRP49683 370 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 FABP6P51161 128 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 RAB38P57729 211 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 FOXL2P58012 376 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SELENOWP63302 87 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ABRAXAS2Q15018 415 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 MPPE1Q53F39 396 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 XKR7Q5GH72 579 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SIRPB2Q5JXA9 342 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ATXN7L2Q5T6C5 722 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 FIGLAQ6QHK4 219 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 TMEM205Q6UW68 189 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 Q6ZVH6 145 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 RTN4RL2Q86UN3 420 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ZNF429Q86V71 674 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SERPINA9Q86WD7 417 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms