RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 GCM1Q9NP62 436 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 OR5H14A6NHG9 310 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 SERPINE3A8MV23 424 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 AQP8O94778 261 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 GLAP06280 429 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 CTXN2P0C2S0 81 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 LRRTM1Q86UE6 522 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 TERB2Q8NHR7 220 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 TCTEX1D2Q8WW35 142 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 ADIPOR1Q96A54 375 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 UQCC2Q9BRT2 126 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 UNKLQ9H9P5 680 aaKnown RBP10.9□□□□□ -0.66
TCOF1-205ENST00000439160 FZR1Q9UM11 496 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 PRELID3BQ9Y3B1 194 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 FGF5P12034 268 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 SLC30A7Q8NEW0 376 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 TMEM68Q96MH6 324 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 MTFP1Q9UDX5 166 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 EDARQ9UNE0 448 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 CSAG2Q9Y5P2 127 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 MRPS18BQ9Y676 258 aaKnown RBP10.9□□□□□ -0.66
TCOF1-205ENST00000439160 A0A0J9YW62 118 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 ZNF83P51522 516 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 PDLIM3Q53GG5 364 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 TMUB2Q71RG4 321 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 ZNF680Q8NEM1 530 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 SLC26A10Q8NG04 563 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 FAM213BQ8TBF2 198 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 RTN4IP1Q8WWV3 396 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 MIXL1Q9H2W2 232 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 TMEM100Q9NV29 134 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 MRPS18AQ9NVS2 196 aaKnown RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 KLHDC2Q9Y2U9 406 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 AKAP6Q13023 2319 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 ZSWIM8A7E2V4 1837 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 THSD7BQ9C0I4 1608 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 A0A1W2PPV4 95 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 NKX6-3A6NJ46 265 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 ST8SIA3O43173 380 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 INHBBP09529 407 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 ZNF14P17017 642 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 TBPP20226 339 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 CD96P40200 585 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 RPP30P78346 268 aaKnown RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 RGS7BPQ6MZT1 257 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 C6orf201Q7Z4U5 140 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 PARP12Q9H0J9 701 aaKnown RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 SIP14410 1827 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 B8ZZF3 427 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 FUT3P21217 361 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 PIGPP57054 158 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 NANOS3P60323 173 aaKnown RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 TSC22D1Q15714 1073 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 ST8SIA4Q92187 359 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 EXTL1Q92935 676 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 AKIRIN1Q9H9L7 192 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 NTMQ9P121 344 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 IGLV3-19P01714 112 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 SP9P0CG40 484 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 NKX2-1P43699 371 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 GNG3P63215 75 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 CEBPEQ15744 281 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 LAIR2Q6ISS4 152 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 ZNF529Q6P280 563 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 OR4A16Q8NH70 328 aa10.89□□□□□ -0.67
TCOF1-205ENST00000439160 RBPMSQ93062 196 aaKnown RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 FAM212BQ9NTI7 297 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-205ENST00000439160 RGS11O94810 467 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 ATPAF1Q5TC12 328 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-205ENST00000439160 STPG1Q5TH74 334 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 TMEM268Q5VZI3 342 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 OR2M7Q8NG81 312 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 PLPPR2Q96GM1 343 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 CMTM3Q96MX0 182 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 SPSB2Q99619 263 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 FAAP24Q9BTP7 215 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 SF3B5Q9BWJ5 86 aaKnown RBP10.88□□□□□ -0.67
TCOF1-205ENST00000439160 HEYLQ9NQ87 328 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-205ENST00000439160 RNF150Q9ULK6 438 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 PI4KAP42356 2102 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 SNRPGP15A8MWD9 76 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 TO15178 435 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 SPRY3O43610 288 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 DXOO77932 396 aaKnown RBP10.88□□□□□ -0.67
TCOF1-205ENST00000439160 HIST1H1DP16402 221 aaKnown RBP10.88□□□□□ -0.67
TCOF1-205ENST00000439160 PSMB6P28072 239 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 PPT1P50897 306 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 TMEM229BQ8NBD8 167 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 ADPRHL1Q8NDY3 354 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 RBMXL1Q96E39 390 aaKnown RBP10.88□□□□□ -0.67
TCOF1-205ENST00000439160 ANKRD34CP0C6C1 535 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 LSM6P62312 80 aaKnown RBP10.88□□□□□ -0.67
TCOF1-205ENST00000439160 GVQW1Q8N7I0 195 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 SUCNR1Q9BXA5 334 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 IGHV1-45A0A0A0MS14 117 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 MT-CO2P00403 227 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 MRPS34P82930 218 aaKnown RBP10.88□□□□□ -0.67
TCOF1-205ENST00000439160 PRDX4Q13162 271 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 ZNF674Q2M3X9 581 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 OR8G2PQ6IF36 304 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms