RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ZNF514Q96K75 400 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 FGF17O60258 216 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 MYOGP15173 224 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 RAB28P51157 221 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 SNU13P55769 128 aaKnown RBP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 SLC17A1Q14916 467 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 MLF2Q15773 248 aaPredicted RBP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 FAM166AQ6J272 317 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 HOGA1Q86XE5 327 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 CDRT4Q8N9R6 151 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 M1APQ8TC57 530 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 THAP3Q8WTV1 239 aaPredicted RBP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 FGGYQ96C11 551 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 SLC17A5Q9NRA2 495 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 DNAJB12Q9NXW2 375 aaKnown RBP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 GDE1Q9NZC3 331 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 WNT6Q9Y6F9 365 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 MPZL1O95297 269 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 AMY2BP19961 511 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 NECAP1Q8NC96 275 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 OR52N4Q8NGI2 321 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 OR6X1Q8NH79 312 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 RAB24Q969Q5 203 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 VN1R3Q9BXE9 311 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 SLC46A2Q9BY10 475 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 WFDC1Q9HC57 220 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 RALYQ9UKM9 306 aaKnown RBP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 ATG2BQ96BY7 2078 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 LOC101059948A0A1B0GTJ6 334 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 EDDM13A0A1B0GTR0 161 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF724A8MTY0 619 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 DEDDO75618 318 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 OR4A8P0C604 315 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 TRA2AQ13595 282 aaKnown RBP eCLIP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 ARHGAP19Q14CB8 494 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 ZIC1Q15915 447 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 ISXQ2M1V0 245 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 OPN5Q6U736 354 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 CARFQ8N187 725 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 SLC35G3Q8N808 338 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 FNDC9Q8TBE3 224 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 TAAR8Q969N4 342 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 GPR87Q9BY21 358 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 EPHX3Q9H6B9 360 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 GPR132Q9UNW8 380 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 FAM221AA4D161 298 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 SLC16A7O60669 478 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 GP1BBP13224 206 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 PRPS1P60891 318 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 COL13A1Q5TAT6 717 aaPredicted RBP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 TMEM52Q8NDY8 209 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 OR52R1Q8NGF1 315 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 OR56B2PQ8NGI1 322 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 OR5H2Q8NGV7 314 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 OR4C3Q8NH37 302 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 AQP3Q92482 292 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 STACQ99469 402 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 LRIT1Q9P2V4 623 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 C19orf53Q9UNZ5 99 aaPredicted RBP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 GAB2Q9UQC2 676 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 UNC80Q8N2C7 3258 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 TMEM269A0A1B0GVZ9 245 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 A0A1W2PQ45 241 aaPredicted RBP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 A0A1W2PQY0 241 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 K7EQS6 105 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 M0R143 59 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 MASP2O00187 686 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 AMBPP02760 352 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 DANCRP0C864 163 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 HOXA6P31267 233 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 JOSD1Q15040 202 aaPredicted RBP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 TPGS2Q68CL5 300 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 FAHD2BQ6P2I3 314 aaPredicted RBP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 LINC00346Q8IVM7 164 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 TMEM123Q8N131 208 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 IL22RA1Q8N6P7 574 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 PLPP5Q8NEB5 264 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 MRPL24Q96A35 216 aaKnown RBP6.63□□□□□ -1.35
CPSF6-202ENST00000435070 FAHD2AQ96GK7 314 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 ZDHHC11Q9H8X9 412 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 EHFQ9NZC4 300 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 SH3BGRL2Q9UJC5 107 aa6.63□□□□□ -1.35
CPSF6-202ENST00000435070 ELOA3CA0A087WX78 387 aaPredicted RBP6.62□□□□□ -1.35
CPSF6-202ENST00000435070 SOCS1O15524 211 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 S1PR1P21453 382 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 FCARP24071 287 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 THBS4P35443 961 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 CSNK2A1P68400 391 aaPredicted RBP6.62□□□□□ -1.35
CPSF6-202ENST00000435070 UNC119Q13432 240 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 AADACL3Q5VUY0 350 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 BTNL3Q6UXE8 466 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 CSNK2A3Q8NEV1 391 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 OR52E1Q8NGJ3 308 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 YPEL4Q96NS1 127 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 NIPSNAP3BQ9BS92 247 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 LOC107986453A0A1B0GWG9 222 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 IGKV1D-16P01601 117 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 RPL23AP62750 156 aaKnown RBP6.62□□□□□ -1.35
CPSF6-202ENST00000435070 FAM3AP98173 230 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 WDR25Q64LD2 544 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms