RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PSG11Q9UQ72 335 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 COLQQ9Y215 455 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 SLC5A6Q9Y289 635 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 ENTPD2Q9Y5L3 495 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 OR51B4Q9Y5P0 310 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 CPSF4LA6NMK7 179 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 CORTO00230 105 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 LEFTY1O75610 366 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 TNFSF15O95150 251 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 SFT2D2O95562 160 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 IRF1P10914 325 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 FAHP16930 419 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 ACRV1P26436 265 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 FXYD6P3P58550 94 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 ICAM4Q14773 271 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 SLC22A6Q4U2R8 563 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 LHX8Q68G74 356 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 SP5Q6BEB4 398 aaPredicted RBP7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 TMCO2Q7Z6W1 182 aaPredicted RBP7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 SLC35F2Q8IXU6 374 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 KLHDC8AQ8IYD2 350 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 CFAP52Q8N1V2 620 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 FAM3DQ96BQ1 224 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 REEP6Q96HR9 211 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 LOXL4Q96JB6 756 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 OR10C1Q96KK4 312 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 BET1LQ9NYM9 111 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 SLC13A4Q9UKG4 626 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 TBX21Q9UL17 535 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 WIPI2Q9Y4P8 454 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 ANAPC1Q9H1A4 1944 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 TRBV5-7A0A0A0MS05 114 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 CDIPTO14735 213 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 B4GALT2O60909 372 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 MC5RP33032 325 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 VIPR2P41587 438 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 BLKP51451 505 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 MANFP55145 182 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 ACTL10Q5JWF8 245 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 SPSB3Q6PJ21 355 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 CLEC18BQ6UXF7 455 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 THSD4Q6ZMP0 1018 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 HOGA1Q86XE5 327 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 NXPE1Q8N323 547 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 SLC38A9Q8NBW4 561 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 ADAMTS15Q8TE58 950 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 PRRX2Q99811 253 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 TMEM9BQ9NQ34 198 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 CREBZFQ9NS37 354 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 SIDT1Q9NXL6 827 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 ELOVL5Q9NYP7 299 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 OR6C3Q9NZP0 311 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 CDC42EP3Q9UKI2 254 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 PAM16Q9Y3D7 125 aa7.86□□□□□ -1.15
CDC42BPA-206ENST00000429440 AQP7P3A6NL99 342 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 CEACAM18A8MTB9 384 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 SLC17A2O00624 439 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 EFEMP2O95967 443 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 PSMB10P40306 273 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 SGSHP51688 502 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 CNN1P51911 297 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 SELENOVP59797 346 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 RAC3P60763 192 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 S100A10P60903 97 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 RAB11AP62491 216 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 PAFAH1B2P68402 229 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 FZD2Q14332 565 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 CEBPEQ15744 281 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 SNAI3Q3KNW1 292 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 GDF7Q7Z4P5 450 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 COMMD2Q86X83 199 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 C20orf196Q8IYI0 205 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 FAM213BQ8TBF2 198 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 PTPMT1Q8WUK0 201 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 C11orf40Q8WZ69 217 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 CCDC74AQ96AQ1 378 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 ATG10Q9H0Y0 220 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 SIRT3Q9NTG7 399 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 KLK13Q9UKR3 277 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 MRPS16Q9Y3D3 137 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 OR5B21A6NL26 309 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF814B7Z6K7 855 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 DEDDO75618 318 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 GJB5O95377 273 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 KLF8O95600 359 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 KLKB1P03952 638 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 CTSBP07858 339 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 MDKP21741 143 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 FRKP42685 505 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 COMPP49747 757 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 NANOS3P60323 173 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 HYAL1Q12794 435 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 FAM166AQ6J272 317 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF880Q6PDB4 577 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 DYRK2Q92630 601 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 PTX4Q96A99 478 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 APH1AQ96BI3 265 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 RBMXL1Q96E39 390 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 SLC41A2Q96JW4 573 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 NUDT16L1Q9BRJ7 211 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 203.6 ms