RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 PLEKHJ1Q9NW61 149 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 OSGIN2Q9Y236 505 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 OR2J2O76002 312 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 IFNA2P01563 188 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 HPNP05981 417 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 HKR1P10072 659 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 PTGER4P35408 488 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 CBX5P45973 191 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 TAS2R46P59540 309 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 SNRPEP62304 92 aaKnown RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 DCDP81605 110 aaKnown RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 C10orf91Q5T1B1 145 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 ANKRD37Q7Z713 158 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 SULF2Q8IWU5 870 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 SEMA6DQ8NFY4 1073 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 FNDC9Q8TBE3 224 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 POC1BQ8TC44 478 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 SECTM1Q8WVN6 248 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 EMG1Q92979 244 aaKnown RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF501Q96CX3 271 aaPredicted RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 PECRQ9BY49 303 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 CHRNA10Q9GZZ6 450 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 MOB1AQ9H8S9 216 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 RPS10P5Q9NQ39 176 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 FBXL17Q9UF56 701 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 LRP4O75096 1905 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 MED19A0JLT2 244 aaPredicted RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 OR5H15A6NDH6 313 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 TRAF3IP2O43734 574 aaPredicted RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 SNRNP70P08621 437 aaKnown RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 OR8U9P0C7N5 309 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 TMEM225BP0DP42 221 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF708P17019 499 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 OPRM1P35372 400 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 RRADP55042 308 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 TMEM33P57088 247 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF616Q08AN1 781 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 OGFOD3Q6PK18 319 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 SGPP2Q8IWX5 399 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 OR14K1Q8NGZ2 314 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 OR8U1Q8NH10 309 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 SAT2Q96F10 170 aaPredicted RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 NUDT16L1Q9BRJ7 211 aaKnown RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 C20orf24Q9BUV8 137 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 CNTNAP3Q9BZ76 1288 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 KLF2Q9Y5W3 355 aaPredicted RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 NPIPB13A6NJU9 1138 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 DHRS7CA6NNS2 312 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 NPIPB4C9JG80 1138 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 ANGPTL7O43827 346 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 IFNA21P01568 189 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 GLAP06280 429 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 F2RL1P55085 397 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 UBE2V2Q15819 145 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 FAM189A2Q15884 450 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 PLPPR5Q32ZL2 321 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 NKAIN1Q4KMZ8 207 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 BRICD5Q6PL45 260 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 SLC25A47Q6Q0C1 308 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 DHRS11Q6UWP2 260 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 SYT13Q7L8C5 426 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 LHFPL1Q86WI0 220 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 SFT2D1Q8WV19 159 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 MRPL24Q96A35 216 aaKnown RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 KIRREL1Q96J84 757 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 SMIM8Q96KF7 97 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 MRGPRX4Q96LA9 322 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 CLCC1Q96S66 551 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 RBM24Q9BX46 236 aaKnown RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 RAB33BQ9H082 229 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 C1orf123Q9NWV4 160 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 PLA2G2EQ9NZK7 142 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 DNAJB11Q9UBS4 358 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 ATPIF1Q9UII2 106 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 PIGLQ9Y2B2 252 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 NUP210LQ5VU65 1888 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 IGHV3-15A0A0B4J1V0 119 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 PMS2P1A4D2B8 440 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 FIGNL2A6NMB9 653 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 NME2P1O60361 137 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 MTRF1O75570 445 aaKnown RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 PIAS2O75928 621 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 DBHP09172 617 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 DAOP14920 347 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 RPS2P15880 293 aaKnown RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 CPT2P23786 658 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 MEOX2P50222 304 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 FXYD4P59646 89 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 SPEM2Q0P670 501 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 ECH1Q13011 328 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 TAF9Q16594 264 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 COA4Q9NYJ1 87 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 MCTS1Q9ULC4 181 aaKnown RBP6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 CA14Q9ULX7 337 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 EDARQ9UNE0 448 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 RALGAPA1Q6GYQ0 2036 aa6.61□□□□□ -1.35
SMARCC1-202ENST00000425518 MYO7BQ6PIF6 2116 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms