RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 ZNF160Q9HCG1 818 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 PCDHGA1Q9Y5H4 931 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 OR2J2O76002 312 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 ADH6P28332 368 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 RPL12P30050 165 aaKnown RBP13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 EIF5AP63241 154 aaKnown RBP13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 SMAD4Q13485 552 aaKnown RBP13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 SMCO1Q147U7 214 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 PRAMEF20Q5VT98 475 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 C17orf82Q86X59 251 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 SLC38A9Q8NBW4 561 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 OR6S1Q8NH40 331 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 TOMM40LQ969M1 308 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 CDX2Q99626 313 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 NUDT16L1Q9BRJ7 211 aaKnown RBP13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 ZNF2Q9BSG1 426 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 KLF2Q9Y5W3 355 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 MEX3AA1L020 520 aaKnown RBP13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 NPIPB13A6NJU9 1138 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 NPIPB4C9JG80 1138 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 TRAF3IP2O43734 574 aaPredicted RBP13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 IFNA2P01563 188 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 CBR1P16152 277 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 PTGER4P35408 488 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 PRSS12P56730 875 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 CLDN17P56750 224 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 DCDP81605 110 aaKnown RBP13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 PLPPR5Q32ZL2 321 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 C10orf91Q5T1B1 145 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 ANKRD37Q7Z713 158 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 SULF2Q8IWU5 870 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 PLPP5Q8NEB5 264 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 FNDC9Q8TBE3 224 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 ZNF501Q96CX3 271 aaPredicted RBP13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 LMAN1LQ9HAT1 526 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 PLEKHJ1Q9NW61 149 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 OSGIN2Q9Y236 505 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 NCOR1O75376 2440 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 IGKV1D-8A0A087WSZ0 117 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 C9JQL5 133 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 HKR1P10072 659 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 FCGR2CP31995 323 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 CBX5P45973 191 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 DEFB123Q8N688 67 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 SEMA6DQ8NFY4 1073 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 EMG1Q92979 244 aaKnown RBP13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 C14orf79Q96F83 325 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 UBE2ZQ9H832 354 aaPredicted RBP13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 FBXL17Q9UF56 701 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 WDFY4Q6ZS81 3184 aa13.34□□□□□ -0.27
SEMA3B-203ENST00000419007 A0A1B0GV50 99 aa13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 OR8U9P0C7N5 309 aa13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 SP6Q3SY56 376 aa13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 LHFPL1Q86WI0 220 aa13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 OR8U1Q8NH10 309 aa13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 POC1BQ8TC44 478 aa13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 SAT2Q96F10 170 aaPredicted RBP13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 MRGPRX4Q96LA9 322 aa13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 USB1Q9BQ65 265 aaKnown RBP13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 PECRQ9BY49 303 aa13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 RAB33BQ9H082 229 aa13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 RPS10P5Q9NQ39 176 aa13.33□□□□□ -0.27
SEMA3B-203ENST00000419007 ZNF708P17019 499 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 SUMO3P55854 103 aaPredicted RBP13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 ZNF616Q08AN1 781 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 FAM189A2Q15884 450 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 SYT13Q7L8C5 426 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 SECTM1Q8WVN6 248 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 SMIM8Q96KF7 97 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 C1orf123Q9NWV4 160 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 WDFY3Q8IZQ1 3526 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 A0A1W2PNV4 684 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 MTRF1O75570 445 aaKnown RBP13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 F2RL1P55085 397 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 DHRS11Q6UWP2 260 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 SGPP2Q8IWX5 399 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 C20orf24Q9BUV8 137 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 PRDM6Q9NQX0 595 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 DNAJB11Q9UBS4 358 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 ATPIF1Q9UII2 106 aa13.33□□□□□ -0.28
SEMA3B-203ENST00000419007 PMS2P1A4D2B8 440 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 OR5H15A6NDH6 313 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 DHRS7CA6NNS2 312 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 PIAS2O75928 621 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 IFNA21P01568 189 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 TMEM225BP0DP42 221 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 RPS2P15880 293 aaKnown RBP13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 CPT2P23786 658 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 TMEM33P57088 247 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 SNRPEP62304 92 aaKnown RBP13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 NKAIN1Q4KMZ8 207 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 OGFOD3Q6PK18 319 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 OR14K1Q8NGZ2 314 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 SFT2D1Q8WV19 159 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 KIRREL1Q96J84 757 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 CNTNAP3Q9BZ76 1288 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 PIGLQ9Y2B2 252 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 IGHV3-15A0A0B4J1V0 119 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 FIGNL2A6NMB9 653 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms