RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 K7ENP7 123 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 MSTNO14793 375 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 MT-ND4P03905 459 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 MMP7P09237 267 aaPredicted RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 KLK2P20151 261 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 ERP29P30040 261 aaKnown RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 KLF9Q13886 244 aaPredicted RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 OR8B8Q15620 311 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 FAM166AQ6J272 317 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 MTFR2Q6P444 385 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 BPIFB2Q8N4F0 458 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 DTX3Q8N9I9 347 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 OR51F2Q8NH61 342 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 MBD3L2Q8NHZ7 208 aaPredicted RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 ZFAND1Q8TCF1 268 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 GPX8Q8TED1 209 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 SPSB4Q96A44 273 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 PLSCR4Q9NRQ2 329 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 IL36GQ9NZH8 169 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 MRPL15Q9P015 296 aaKnown RBP7.31□□□□□ -1.24
USP54-203ENST00000418501 MEMO1Q9Y316 297 aa7.31□□□□□ -1.24
USP54-203ENST00000418501 EXPH5Q8NEV8 1989 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 TRAV6A0A075B6T7 132 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 A0A1B0GUH1 482 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 ANKRD34BA5PLL1 514 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 POM121CA8CG34 1229 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 PTH2RP49190 550 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 UBE2MP61081 183 aaKnown RBP7.3□□□□□ -1.24
USP54-203ENST00000418501 PPP1CBP62140 327 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 DBPQ10586 325 aaPredicted RBP7.3□□□□□ -1.24
USP54-203ENST00000418501 PRDX4Q13162 271 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 NDUFA5Q16718 116 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 SCGB2B2Q4G0G5 96 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 SFRP4Q6FHJ7 346 aaPredicted RBP7.3□□□□□ -1.24
USP54-203ENST00000418501 Q6ZSR3 168 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 FJX1Q86VR8 437 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 OR56B2PQ8NGI1 322 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 OR4K15Q8NH41 348 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 SDHCQ99643 169 aaPredicted RBP7.3□□□□□ -1.24
USP54-203ENST00000418501 CMSS1Q9BQ75 279 aaKnown RBP7.3□□□□□ -1.24
USP54-203ENST00000418501 PLSCR2Q9NRY7 297 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 PRSS50Q9UI38 385 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 hCG_38984A0A1B0GV85 526 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 PLSCR5A0PG75 271 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 CD300LBA8K4G0 201 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 TMEM14DPA8MWL7 114 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 MCRIP1C9JLW8 97 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 RGS13O14921 159 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 DIRAS3O95661 229 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 VSIG8P0DPA2 414 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 CD37P11049 281 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 PMELP40967 661 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 KIR2DL3P43628 341 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 RRAS2P62070 204 aaPredicted RBP7.3□□□□□ -1.24
USP54-203ENST00000418501 ZNF529Q6P280 563 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 MDP1Q86V88 176 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 CD163Q86VB7 1156 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 NR2C2APQ86WQ0 139 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 TRIM63Q969Q1 353 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 C20orf85Q9H1P6 137 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 PLA2G10O15496 165 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 TIMM8AO60220 97 aaPredicted RBP7.3□□□□□ -1.24
USP54-203ENST00000418501 TGM6O95932 706 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 GLAP06280 429 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 FGL1Q08830 312 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 GRK1Q15835 563 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 CEACAM21Q3KPI0 293 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 LPCAT3Q6P1A2 487 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 PRSS45Q7RTY3 260 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 CADM3Q8N126 398 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 OR4D6Q8NGJ1 314 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 ZNF69Q9UC07 566 aa7.3□□□□□ -1.24
USP54-203ENST00000418501 TMEM8BA6NDV4 472 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 ZNF850A8MQ14 1090 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 DLL1O00548 723 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 DBHP09172 617 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 PGAM2P15259 253 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 HERV-K104P61576 105 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 CDK10Q15131 360 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 OR8G1Q15617 311 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 TBR1Q16650 682 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 C3orf36Q3SXR2 165 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 GCNT2Q8N0V5 402 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 HYLS1Q96M11 299 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 SYT3Q9BQG1 590 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 PKIBQ9C010 78 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 TMEM100Q9NV29 134 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 ZNF701Q9NV72 531 aaPredicted RBP7.29□□□□□ -1.24
USP54-203ENST00000418501 COQ3Q9NZJ6 369 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 KCNIP3Q9Y2W7 256 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 RBMX2Q9Y388 322 aaKnown RBP7.29□□□□□ -1.24
USP54-203ENST00000418501 KIF26BQ2KJY2 2108 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 KIR2DS1A0A191URI9 304 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 NDUFB6O95139 128 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 MELTFP08582 738 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 GABRR1P24046 479 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 KIR2DS4P43632 304 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 CXADRP78310 365 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 FAM3AP98173 230 aa7.29□□□□□ -1.24
USP54-203ENST00000418501 KLRB1Q12918 225 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms