RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 RNF170Q96K19 258 aa17.11■□□□□ 0.33
PKNOX1-202ENST00000418336 RASSF4Q9H2L5 321 aa17.11■□□□□ 0.33
PKNOX1-202ENST00000418336 PIGLQ9Y2B2 252 aa17.11■□□□□ 0.33
PKNOX1-202ENST00000418336 AUP1Q9Y679 476 aa17.11■□□□□ 0.33
PKNOX1-202ENST00000418336 hCG_1807616A0A1W2PRN6 198 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 ANXA2P2A6NMY6 339 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 P2RY10O00398 339 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 SLC16A6O15403 523 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 KIR3DL2P43630 455 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 GPM6AP51674 278 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 HILS1P60008 231 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 RIPPLY1Q0D2K3 151 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 CDONQ4KMG0 1287 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 BCL2L15Q5TBC7 163 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 ATPAF1Q5TC12 328 aaPredicted RBP17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 MEDAGQ5VYS4 303 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 ZBTB49Q6ZSB9 765 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 USP43Q70EL4 1123 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 NLRC3Q7RTR2 1065 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 TEX29Q8N6K0 151 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 UPRTQ96BW1 309 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 RNFT2Q96EX2 444 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 ESM1Q9NQ30 184 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 TRIM36Q9NQ86 728 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 ACOXLQ9NUZ1 547 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 FAM118AQ9NWS6 357 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 IMPAD1Q9NX62 359 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.1■□□□□ 0.332e-7■■■■□ 25.5
PKNOX1-202ENST00000418336 ORC6Q9Y5N6 252 aa17.1■□□□□ 0.33
PKNOX1-202ENST00000418336 A0A0A6YYJ9 748 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 DHRS7CA6NNS2 312 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 ADAM20O43506 726 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 NDUFA2O43678 99 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 RPP14O95059 124 aaKnown RBP17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 KRT8P05787 483 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 MUC1P15941 1255 aaPredicted RBP17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 NPY4RP50391 375 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 KCNJ8Q15842 424 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 TP53I3Q53FA7 332 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 WDR38Q5JTN6 314 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 YIPF7Q8N8F6 280 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 OR5A2Q8NGI9 324 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 C12orf43Q96C57 262 aaKnown RBP17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 LGALS12Q96DT0 336 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 SLC6A7Q99884 636 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 NUDT16L1Q9BRJ7 211 aaKnown RBP17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 C19orf24Q9BVV8 132 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 GMPPBQ9Y5P6 360 aa17.09■□□□□ 0.33
PKNOX1-202ENST00000418336 LOC100130705A0A1B0GUX0 176 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 ZNF732B4DXR9 585 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 PLATP00750 562 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 TFF1P04155 84 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 IGHV4-38-2P0DP08 117 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 MMP9P14780 707 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 TGM4P49221 684 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 ZNF91Q05481 1191 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 FAM216BQ8N7L0 139 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 AQP3Q92482 292 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 ZNF69Q9UC07 566 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 ENPP5Q9UJA9 477 aa17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 SOX21Q9Y651 276 aaPredicted RBP17.08■□□□□ 0.32
PKNOX1-202ENST00000418336 PQLC2LA1A4F0 135 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 DVL1O14640 695 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 AKR7A2O43488 359 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 DBTP11182 482 aaKnown RBP17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 SELLP14151 372 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 NANOS3P60323 173 aaKnown RBP17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 GNG3P63215 75 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 MICBQ29980 383 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 FDX2Q6P4F2 183 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 C9orf139Q6ZV77 190 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 MOB3CQ70IA8 216 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 DOK3Q7L591 496 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 BCL6BQ8N143 479 aaPredicted RBP17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 ZDHHC22Q8N966 263 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 ANGPTL6Q8NI99 470 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 ZNF48Q96MX3 618 aaPredicted RBP17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 CCL13Q99616 98 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 MRPS18AQ9NVS2 196 aaKnown RBP17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 ZNF222Q9UK12 451 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 NUP50Q9UKX7 468 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 GTF2A1LQ9UNN4 478 aa17.07■□□□□ 0.32
PKNOX1-202ENST00000418336 A6NIN4 97 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 OR5B21A6NL26 309 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 WBP4O75554 376 aaKnown RBP17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 MTRF1O75570 445 aaKnown RBP17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 RGS9O75916 674 aaPredicted RBP17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 NRASP01111 189 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 IGHA1P01876 353 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 OR12D2P58182 307 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 FGF12P61328 243 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 ZSCAN26Q16670 478 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 CLVS2Q5SYC1 327 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 PLCXD3Q63HM9 321 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 ZNF788Q6ZQV5 615 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 COMMD2Q86X83 199 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 LY6G5BQ8NDX9 201 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 C22orf15Q8WYQ4 148 aa17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 C1orf147Q96MC9 270 aaPredicted RBP17.06■□□□□ 0.32
PKNOX1-202ENST00000418336 GAFA1Q96PS6 74 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms