RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 STAC2Q6ZMT1 411 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 B9D1Q9UPM9 204 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 POMT1Q9Y6A1 747 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 CYR61O00622 381 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 CD276Q5ZPR3 534 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 GALNT16Q8N428 558 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 FAM26EQ8N5C1 309 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 LINC01465Q8N7H1 131 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 OR2A1Q8NGT9 310 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 RAB1CQ92928 201 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 OCIAD1Q9NX40 245 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 YBX2Q9Y2T7 364 aaKnown RBP10.06□□□□□ -0.8
PTCH1-205ENST00000418258 TNRC6CQ9HCJ0 1690 aaKnown RBP10.06□□□□□ -0.8
PTCH1-205ENST00000418258 H7BYZ3 331 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF354AO60765 605 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF17P17021 662 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 RPL12P30050 165 aaKnown RBP10.06□□□□□ -0.8
PTCH1-205ENST00000418258 LGALS7P47929 136 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 DHRS7BQ6IAN0 325 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-205ENST00000418258 LRRTM1Q86UE6 522 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 OR13F1Q8NGS4 319 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 FKBP11Q9NYL4 201 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 TUBGCP6Q96RT7 1819 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 PI4KAP42356 2102 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 HTN1P15515 57 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 THBS4P35443 961 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 ANKRD53Q8N9V6 530 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 OR5D13Q8NGL4 314 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 OR2G2Q8NGZ5 317 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 RNF167Q9H6Y7 350 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 WBP1LQ9NX94 342 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 LRP12Q9Y561 859 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 ADAM10O14672 748 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 ANKRD34CP0C6C1 535 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 CCL2P13500 99 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 PSMB6P28072 239 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 DDOSTP39656 456 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 PXDC1Q5TGL8 231 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 ETFRF1Q6IPR1 90 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 OR5H6Q8NGV6 325 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 UBALD1Q8TB05 177 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 ISL2Q96A47 359 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 DUS3LQ96G46 650 aaKnown RBP10.06□□□□□ -0.8
PTCH1-205ENST00000418258 RSRP1Q9BUV0 290 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 IL36GQ9NZH8 169 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 IGHV1OR15-9A0A0B4J2B8 117 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 TUBAL3A6NHL2 446 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 PPP1R2P9O14990 202 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 CEACAM3P40198 252 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 CTU2Q2VPK5 515 aaKnown RBP10.06□□□□□ -0.8
PTCH1-205ENST00000418258 BHLHA15Q7RTS1 189 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-205ENST00000418258 OR51I2Q9H344 312 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 TMPRSS5Q9H3S3 457 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 FBXO8Q9NRD0 319 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 LSM2Q9Y333 95 aaKnown RBP10.06□□□□□ -0.8
PTCH1-205ENST00000418258 KIF13BQ9NQT8 1826 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 CNN1P51911 297 aaKnown RBP10.06□□□□□ -0.8
PTCH1-205ENST00000418258 DGCR2P98153 550 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 PMP22Q01453 160 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 FZD5Q13467 585 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 TCTN1Q2MV58 587 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 CYHR1Q6ZMK1 362 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 OR52N4Q8NGI2 321 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 CT55Q8WUE5 264 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 PP6455Q8WZ26 134 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 GRAMD2BQ96HH9 432 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 OR8B4Q96RC9 309 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 GABARAPL1Q9H0R8 117 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 THYN1Q9P016 225 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 A0A1W2PRD5 423 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 A0A1W2PRF3 423 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 A0A1W2PRM7 423 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 IFITM5A6NNB3 132 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 CDK2AP1O14519 115 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 AGFG2O95081 481 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 EPHA2P29317 976 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 IGFBP7Q16270 282 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 PAQR6Q6TCH4 344 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 OR4F17Q8NGA8 305 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 FAM53CQ9NYF3 392 aa10.06□□□□□ -0.8
PTCH1-205ENST00000418258 H3BP45 60 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 NGFP01138 241 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 PDCD1Q15116 288 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF788Q6ZQV5 615 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 OR1L4Q8NGR5 311 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 SCN8AQ9UQD0 1980 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 METAP1P53582 386 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 OR10Z1Q8NGY1 313 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 KPTNQ9Y664 436 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 ZAR1LA6NP61 321 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 LY86O95711 162 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 SNRPNP63162 240 aaKnown RBP10.05□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF260Q3ZCT1 412 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 SLC24A4Q8NFF2 622 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 BLNKQ8WV28 456 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 DOK1Q99704 481 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 IGHV3-13P01766 116 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 IGHV3-7P01780 117 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 SULT1A3P0DMM9 295 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 SULT1A4P0DMN0 295 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms